Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac3g1496 | ATGCAGACTTTTCTGTTTCTGCTTAGAAATGTGGTCGCATTTCATTATGCCTTGGCAGAAATCACATTTCCTCCCTCATCGACGGCGCTTCCTCCCTCACCGACGGCAACCCTCGACGACGAGCTCACCGACGGCGTCCGAAGATTTCTCCCTCACCGACGTCGACTGTCTTCTCGCGTGCGTTTCCCTAGCCCAGCTCTGGATGTGGGGGTTTCAACACCAGCTCCACAAGCAGTCCATGCAAAGAAATTGGTTCTGTTGTGGTTTCTTCAGGAATGTCTATTATCTCTAACGCAAAGGCAGGACATTGTTGTTGCTCCTTTTGCCTTTGTCTTGGACAGAAAAATAAGGCGAAAGATGACTCTTCGAATTTTCGCCAAGATTCTTCTACTGGGTTTACTCGAGCCTGTAATAGCCCAGAGCTTGATTTACTCTGGTACTAAATACACAACTGCAACTTTTGCAACTGCCATGTGCAATATTCTTCCTGCCTTTGCGTTTCTAATGGCTTGGATTTGCATAATGGAGAAGGTGAATATTAAAAGTTTACGAAGCCAGGCAAAGATTTTAGGCACTTTAGTTACAGTAGGAGGAGCAATGATGATGGCTCTTATAAAAGGACCCATGTTGAGTTTGCCTTGGACCAAAGAGAATTTCAACCCTCACTCTTATTCTAACATTGGCATAGTATATCTTCTGGGATTGCCTATTATCTCCAAGGAATTGTGGTGA | 732 | 44.95 | MQTFLFLLRNVVAFHYALAEITFPPSSTALPPSPTATLDDELTDGVRRFLPHRRRLSSRVRFPSPALDVGVSTPAPQAVHAKKLVLLWFLQECLLSLTQRQDIVVAPFAFVLDRKIRRKMTLRIFAKILLLGLLEPVIAQSLIYSGTKYTTATFATAMCNILPAFAFLMAWICIMEKVNIKSLRSQAKILGTLVTVGGAMMMALIKGPMLSLPWTKENFNPHSYSNIGIVYLLGLPIISKELW | 243 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 13729475 | 13731932 | - | Lag0035024.1 | Lac3g1496 | 601918 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac3g1496 | 243 | PANTHER | WAT1-RELATED PROTEIN | 103 | 234 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
| Lac3g1496 | 243 | Pfam | EamA-like transporter family | 103 | 201 | IPR000620 | GO:0016020(InterPro) | |
| Lac3g1496 | 243 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 110 | 204 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac3g1496 | Lac-Chr3:13729475 | Lac8g2486 | Lac-Chr8:42795169 | 3.20E-61 | dispersed | |
| Lac1g1566 | Lac-Chr1:36941275 | Lac3g1496 | Lac-Chr3:13729475 | 9.10E-27 | wgd | |
| Lac3g1496 | Lac-Chr3:13729475 | Lac5g1120 | Lac-Chr5:18839731 | 9.70E-34 | wgd | |
| Lac3g1496 | Lac-Chr3:13729475 | Lac6g1663 | Lac-Chr6:24501312 | 1.40E-16 | wgd | |
| Lac3g1496 | Lac-Chr3:13729475 | Lac6g2165 | Lac-Chr6:37951005 | 6.40E-86 | wgd |
Pathway information