Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g1663 ATGGGGTCCTGCTTGTCTACAGGAAGTAAGAGGGCCATTCCTGGGTCCCCTGTATCTCCTGTGCTGGGAGCAAGGAAACAGATAGACTCAGACAATGGGCTGAAGTCTAAGAATTCTGTGTTTGAGCAGCAGAGAGAAGCAACAGTGCACAGAATTCCTGGTAGGATGTTCTTGAATGGATCCAGTGAAGTTGCCTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGGTTGTGTGGGAGAATTTCGGCTCCAGAACAGATTCGTTCTTCTGTGGAGTTTTTGATGGCCATGGTCCATATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCTCTGAAACTGACTGCACATTGGGAGGCTAATGCAAGCAGTGAGGACATTTCTAACGAGTTCGGTAGTAAAACAGAAGGTGTAAACAATGAAGATTCTGCATTAGCAACTGGTTGGGAGGAAGCTAGTTCTCCTCTTAAGCACCATGAAATTTCTGAAAAACTGAAGGAATCATTTCTGAAGGCTTTTAAGATTATGGATGGGGAACTCAAAATGCAACCAAGTATTGATTGTTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGGGACTCGCGAGCTGTGCTGGGTACTAGAGATAAGGATAATTCTCTTCAAGCAGTTCAGTTGACCATAGATCTCAAGCCTGATATTCCAGCGGAAGCGGAGAGAATTCTCAAATGCAAAGGTCGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTCGGGTATGGCTTCCAAACAATGATTCCCCTGGGCTGGCAATGGCTCGATCTTTCGGAGACTTTTGCCTCAAGGATTTTGGTCTAATTTCTGTTCCTGAAATATCATATCGGTATCTGACAGACAAGGATGAGTTCATAGTTTTAGCTACAGACGGAATTTGGGATGTTCTCTCAAACAAAGAGGTAGTTGACATTGTAGCATCGGCCCCAGCTCGTTCCGCAGCCCGATCATTGGTTGAGGCTGCAACTAAAGCATGGAGAAGCAAGTTTCCTTCTTCCAACGTTGACGACTGTGCTGTTGTGTGCCTCTTCCTCGACTCGAACTTGAACATTATGGCGTCGGAGACAAATATTAAATCCAAGGAAGAGATTAATTCAGCAATCCAAGCTGAGACAGCCATGGTGGATGATGATGATGATGATGTCTCAGGAGGAGCTGGTTTACGGAATTCGGAAATCGTGCAAACATTCGGAGTTCCTCCGAGAATTGTACGGTAG 1308 45.57 MGSCLSTGSKRAIPGSPVSPVLGARKQIDSDNGLKSKNSVFEQQREATVHRIPGRMFLNGSSEVASLHTQQGKKGMNQDAMVVWENFGSRTDSFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANASSEDISNEFGSKTEGVNNEDSALATGWEEASSPLKHHEISEKLKESFLKAFKIMDGELKMQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDKDNSLQAVQLTIDLKPDIPAEAERILKCKGRVFAHQDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRYLTDKDEFIVLATDGIWDVLSNKEVVDIVASAPARSAARSLVEAATKAWRSKFPSSNVDDCAVVCLFLDSNLNIMASETNIKSKEEINSAIQAETAMVDDDDDDVSGGAGLRNSEIVQTFGVPPRIVR 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16338429 16340938 + Lag0035191.1 Lac3g1663 602085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g1663 435 SUPERFAMILY PP2C-like 62 376 IPR036457 -
Lac3g1663 435 CDD PP2Cc 64 375 IPR001932 -
Lac3g1663 435 SMART PP2C_4 53 373 IPR001932 -
Lac3g1663 435 Pfam Protein phosphatase 2C 166 350 IPR001932 -
Lac3g1663 435 PANTHER PROTEIN PHOSPHATASE 53 374 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac3g1663 435 ProSiteProfiles PPM-type phosphatase domain profile. 64 375 IPR001932 -
Lac3g1663 435 Gene3D - 59 377 IPR036457 -
Lac3g1663 435 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1663 Lac-Chr3:16338429 Lac4g1732 Lac-Chr4:36221281 7.60E-130 dispersed
Lac3g1663 Lac-Chr3:16338429 Lac6g1670 Lac-Chr6:24678812 3.90E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g1663 - - - 0.0