Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac3g2151 | ATGGTGCCAACAATCTGTGAGAGTTGCAATGAGATGATTAACAAATGGGAAAGAATGATCTCAGAAGGCGGATTTTGCGAATTGGATGTGATGCCTCATTTACAAAATTTGGCAGCTGATGTCATTTCTCGAACAGCATTTGGAAGTAGTTATGAGGAAGGAAAAATCATCTTTCAACATCTAAAAGAATTGACAGATTTGGTCCTTAAAGTTACATCTAGAGTTTACATACCGGGATGGAGGTTTCTACCAACCAAGTCTAACAATAGAATGAAAAAGATAAGTAAAGAAATAAAAACTGTGCTGTTTAGCCTTGTCAATAAAAGGCAAATGAGTATGAAGGCAGGTGACACAATAATACATAATGATCTATTAAGCATCCTTCTAGAATCAAATTTCAAAGAAATTCAAGAACATGGAAGTAACGATATTGGAATGAGCATAGAAGACTTGATTGAAGAATGTAAGGTTTTCTATTTTGCTGGCCAAGAAACCACAGCATTGTTACTAGTTTGGACCATGGTTTTGTTGAGCTCAAATCCAAAATGGCAAGAGCGAGCAAGAGCTGAGGTCCTAGAAGTTTTTGGTAACAACAAACCAGATTTTGATGGTTTAAATCGCCTAAAAATTGTTACTATGATTTTGAACGAGGTTCTTAGATTATACCCACCGGGAGGAATGTCTAGTCGTCTTATTAAAAAGGAAACACGACTTGGAAAAGTGACGCTGCCGGCTGGAGTAATGTTGTACTTTCCAATTGCTCTTATCCATCGTGATCAACAGCTATGGGGTGAGGATGCAAATGAATTTAATCCACAAAGATTTGCTGAAGGAGTTTCAAAAGCAACACAAAATCAAGCTGGGTTCTTCCCATTTGGATGGGGTCCTCGAATATGCATCGGACAAAATTTTGCCTTGATTGAGGCCAAAATTGCATTGTCCATGATCCTACAACACTTCAAATTTGAACTTTCTTCTTCCTATACTCATGCTCCTACATTTGTTTTTACTATTCAACCTCAATATGGAGCTCATATCATCCTACATAAACTTTAG | 1056 | 37.22 | MVPTICESCNEMINKWERMISEGGFCELDVMPHLQNLAADVISRTAFGSSYEEGKIIFQHLKELTDLVLKVTSRVYIPGWRFLPTKSNNRMKKISKEIKTVLFSLVNKRQMSMKAGDTIIHNDLLSILLESNFKEIQEHGSNDIGMSIEDLIEECKVFYFAGQETTALLLVWTMVLLSSNPKWQERARAEVLEVFGNNKPDFDGLNRLKIVTMILNEVLRLYPPGGMSSRLIKKETRLGKVTLPAGVMLYFPIALIHRDQQLWGEDANEFNPQRFAEGVSKATQNQAGFFPFGWGPRICIGQNFALIEAKIALSMILQHFKFELSSSYTHAPTFVFTIQPQYGAHIILHKL | 351 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 26961459 | 26963997 | - | Lag0035679.1 | Lac3g2151 | 602573 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac3g2151 | 351 | PRINTS | P450 superfamily signature | 161 | 178 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | P450 superfamily signature | 290 | 299 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | P450 superfamily signature | 213 | 224 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | P450 superfamily signature | 299 | 310 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 292 | 301 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lac3g2151 | 351 | SUPERFAMILY | Cytochrome P450 | 1 | 349 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | E-class P450 group I signature | 299 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | E-class P450 group I signature | 37 | 55 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | E-class P450 group I signature | 170 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | E-class P450 group I signature | 289 | 299 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PRINTS | E-class P450 group I signature | 150 | 167 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | Gene3D | Cytochrome P450 | 1 | 350 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | Pfam | Cytochrome P450 | 1 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac3g2151 | 351 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 1 | 343 | IPR050665 | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac3g2014 | Lac-Chr3:23764890 | Lac3g2151 | Lac-Chr3:26961459 | 1.40E-174 | dispersed | |
| Lac3g2151 | Lac-Chr3:26961459 | Lac6g2958 | Lac-Chr6:47176422 | 2.80E-82 | dispersed | |
| Lac3g2151 | Lac-Chr3:26961459 | Lac3g0839 | Lac-Chr3:6698421 | 7.30E-83 | transposed |
Pathway information