Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g2269 ATGGATCCCCGCAACGACGCCGTTTTCCCCGACGAAGACCTCGAGGACGACGAGGAATCCCTCGACGACGACGACGACGAAGAGGAGGAGGAATTGAACGACGAACCTTCCCCTTCCACTTCCTCCGCCGGCGCCACCGTTGTTCCTTCTGTTTCCGCCCTTGTCACCGTCGCCACTCCCGGCACCACCGACCGTCCCGTCGCCCTTGTTCCTCCCCCTTCGATCGCCTCCATCTCCTCCGCCGATCTGATCCGCCAGCGCCTCGAGACCGCCGCCGCCGAGCCTTTGACCTTGCAGGGCGAGAAGAAGCCCTTGGATGAGTCCAGGAAGTTGTTTCAACGCCTCTGGACCGATGAGGATGAGATCGAGCTCTTGCAGGGGTTTTTGGATTACACGATGCAGCGGGGTACCACTCACCATCATCAGAACGATACGGCCTTGTTCTATGACCAGATCAAGTCCAAATTACAGCTCGATTTTAACAAGAATCAGCTCGTCGAGAAGCTTAGGAGGTTGAAGAAGAAGTACCGTAACGTTATCGGTAAGATTAGCTCTGGTAAGGAGTTCAATTTCAAAAGCCCTCACGATCAGGCTACGTTCGAGATCTCTCGCAAGATCTGGAGCACTACCGGCCGAATTGGAGTCGATGACAACGCTTTGGACGACGACGAGCCTCCTCCGCCTCCGTATGCCAACTACATGGACGCTAGAAACGAAGAGATGATGGCGAATTGCGCAGAGAAGAAACCGACGCCGACTCCGAAATCGCGGAAGCGTTCGCGGCCTGGATCGGGGTTGAGAATGGACGGGCCGCGTTCATCGAATGAGAATTTGAATAAAGAGAAGAACAGTACCTACAACAACAACAACAACGATAATGTCAATAACGTAGCGGTAGCAGGATTGATCGAGGAGACGGTGAGGAGCTGCCTGTCGCCTTTGTTTAAGGAATTGTTGAGTAGTTCCATGGGAGGAGGGCTCTGTGGAGGCAGAGGGTTCAGTGGGTTGGCTTTGCATCCAATTCCATTGAGCTTCGGTGGAGCTTCAATCAATTTCGGAGGTGGGGGAGAAATGTCGGATGAGAGGTGGAGGAAGCAGCAGATTTTGGAACTGGAGGTTTATTCGAAGAGGTTGGAGTTGGTTCAGGAACAAATTAAGACGGCATTAGAAGACTTGAGGTCCATGGGAGGCTGA 1194 53.6 MDPRNDAVFPDEDLEDDEESLDDDDDEEEEELNDEPSPSTSSAGATVVPSVSALVTVATPGTTDRPVALVPPPSIASISSADLIRQRLETAAAEPLTLQGEKKPLDESRKLFQRLWTDEDEIELLQGFLDYTMQRGTTHHHQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKEFNFKSPHDQATFEISRKIWSTTGRIGVDDNALDDDEPPPPPYANYMDARNEEMMANCAEKKPTPTPKSRKRSRPGSGLRMDGPRSSNENLNKEKNSTYNNNNNDNVNNVAVAGLIEETVRSCLSPLFKELLSSSMGGGLCGGRGFSGLALHPIPLSFGGASINFGGGGEMSDERWRKQQILELEVYSKRLELVQEQIKTALEDLRSMGG 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30439181 30440374 - Lag0035797.1 Lac3g2269 602691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g2269 397 MobiDBLite consensus disorder prediction 1 47 - -
Lac3g2269 397 MobiDBLite consensus disorder prediction 9 35 - -
Lac3g2269 397 MobiDBLite consensus disorder prediction 213 292 - -
Lac3g2269 397 Pfam Glabrous-enhancer-binding protein-like family, DBD domain 112 208 IPR053932 -
Lac3g2269 397 Coils Coil 162 182 - -
Lac3g2269 397 PANTHER BNAANNG10740D PROTEIN-RELATED 15 394 IPR007592 GO:0005634(PANTHER)|GO:0006355(InterPro)
Lac3g2269 397 Coils Coil 371 391 - -
Lac3g2269 397 MobiDBLite consensus disorder prediction 270 292 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0643 Lac-Chr12:6735556 Lac3g2269 Lac-Chr3:30439181 1.30E-14 dispersed
Lac3g2269 Lac-Chr3:30439181 Lac6g2739 Lac-Chr6:45122323 2.90E-35 dispersed
Lac3g2269 Lac-Chr3:30439181 Lac1g3258 Lac-Chr1:52450577 8.10E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
23658 PF04504 DUF573 2.20E-34 CL0123 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g2269 - - - 0.0