Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g2412 ATGATGGCTGGAAGTAATCAAATCAATCTCAACGACTCCAGGATGGTGGTTCCACTTAATACCTGGGTTCTCATTTCCAACTTCAAGTTGGCTTACAATCTTCTTCGTCGCCCTGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTCGACCGAAAAGTCCCTGCCAATGCTAACCCTGTTGATGGGACTTTCTCGTTCGATGTCATTATTGATCGTGCCACGAGTCTTCTATGTAGAATATATCGACCGGCCAATGGAGCCGAACCTCAGACTACTAATATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGCTGTTGTCCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCACATTCGTCTGCTAACAGTGCTATCTATGATACGCTATGTCGCCGATTGGTCAGCCTTTGCAAGGCTGTTGTTGTCTCTGTGAACTATCGGCGTGCACCTGAAAATCGGTATCCATGTGCTTATGATGATGGATGGACTGCACTCAATTGGGTGAATTCAAGGTCATGGCTTCAAAGTAAAGACTCAAAGACCTATATCTATTTGGCTGGCGATAGTTCTGGTGGAAACATCGTACACCATGTTGCATCAAGAGCAGTAAAGTCGGGGATCGAAGTATTGGGTAATATACTTCTCAATCCTATGTTTGGAGGGCAAGAAAGAACTAAATCTGAGATTCGGCTGGATGGAAAGTATTTCGTCACCATTCGGGATAGAGACTGGTATTGGAGGGCCTTCCTCCCTGAAGGGGAAGATAGAGACCATCCAGCATGTAATCCCTTCGGCCCGAGGGGTTATAGCCTCGAAGGAATCAAGTTCCCGAAGAGCCTTGTCGTGGTGGCTGGTTTAGATCTCGTCCAAGACTGGCAATTGGCATATGCCAAAGGGCTAGAGAATGATGGCCAAGAGGTGAAACTCTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGCTACCGAATACTGAGCACTTCTATACTGTCATGGACGAGATAAGTGAATTTATTTTGGATGTAACTGTTTGCTATGGCTCTTATGGCAGCAAGAGCAGCAGCATAGCTTTAAGCACAGCAGGGTTCCAGTTTAACATTACCCGCCCTGGCATCTCGCTGCAACGCGACGTAGAGGAAGGATCCAAGTTTACGGGTAACTTTTTCAGTAGCTTGGTTTTATTCCTGCTTAGTGACATATTATATATAGCTAATTTCAGAACATGGTTGGGGAAACATCCATGA 1254 45.37 MMAGSNQINLNDSRMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGTFSFDVIIDRATSLLCRIYRPANGAEPQTTNIVDLEKPVDSEAVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWTALNWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAVKSGIEVLGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGYSLEGIKFPKSLVVVAGLDLVQDWQLAYAKGLENDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFILDVTVCYGSYGSKSSSIALSTAGFQFNITRPGISLQRDVEEGSKFTGNFFSSLVLFLLSDILYIANFRTWLGKHP 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34540300 34542286 + Lag0035940.1 Lac3g2412 602834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g2412 417 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787(InterPro)
Lac3g2412 417 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787(InterPro)
Lac3g2412 417 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Lac3g2412 417 FunFam Gibberellin receptor GID1 2 344 - -
Lac3g2412 417 PANTHER ARYLACETAMIDE DEACETYLASE 37 336 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Lac3g2412 417 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Lac3g2412 417 SUPERFAMILY alpha/beta-Hydrolases 59 342 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g2412 Lac-Chr3:34540300 Lac4g2345 Lac-Chr4:43123434 1.30E-150 dispersed
Lac3g2412 Lac-Chr3:34540300 Lac12g1866 Lac-Chr12:35162374 1.70E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g2412 K14493 - csv:101213253 666.381