Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g2732 ATGAATCTAATGTGTCTGAGGAGAAAGGTCTATAACAAATTAAATATTGGAGGTTACATCATCAAACTAGATGCTCTCAACGAGATTATTTCCTTTGCCTCTGGCTTCCCTGGCTCCGAAGGCGAGGCTGTAGATCTTGTTCTCGCCAGTCTCAATCACCAATCATGTACTACTACATTTTATTTTCATACTGCAATTGTAACATCTTCTCAGCAATTCACTTCATTTTTTCTCGTGGACAATTTCTTTGTTTTTGTTGCCGTGGCAGTACAATCTTTGATATTAGACAGCGATGTAGTGCATAGGGTTGTTAGCATTCTTGCAAGCGATGAAGTGGGAAAAGAAAGTCTCGATACCATTACTAGTACATCTGCTCTTTGCATCATAAACGCTTTTGATATCTCGAAGTTTCGTTATAATCCCATCAAGAAGATCTTCCACCTGCACACAGGAAATCTTCCTTATCATGGGGATGGTAACGCTAAAGCTGCTTTGTATAGAGATAGGTTTCTCCTGCTTTCCCAACTGCTCTCCCGGAATCAACATTTCTCCAAGCCTGCTTTTGACACCAGCATGTCTCACTTTCGAAGTTGTGAGATTTCTCCTATTCAGTCTCTAGTGGGGCAAGGAGGGAGGAAATGGGTCATGGGATTGATCTCTCAGATGGAGGATGGTCACTTTTACTTGGAGGACTTTACTGCGTCTGTGGAAATAAATTTAACTAATGCCATATCCTTTACTGACATCTTCTATAGTGTGGAAAAATCTGAACTTCACAAGATAACTACAGGTCTATTTACAGAGAACACCATCGTTGTAGCAGAAGGAGAGATGCTTGTGGAGGGCATTTTTCAGGTTATTACATGTGGATTTCCTCCATTAGAGGACAGGGACAAGTCTCTTAAATTCTTAGCAGGCCAGGACTTCTTTGGTGGTGGTGCTTTAACTAAGGAGGAGACTTTCAGGCTTGCAGATCTGGAAAAGAGAGCCGTTAATGATATGTTTGTCGTACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCGTTCTTGATAGTTTTGAAAATGTAGAAGTGGTTCCTTCCTTATTTGTTTTGATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTTAATTCTTTCTCAAGCCTAAGACTACAATTTGGTATGCTAGGAAAAATGATAGCAGCTCATCCACGATTAAAAGAGCACAGCAAGTTTCTTTTTATTCCCGGTCCAGATGATGCAGGTCCATCAACAGTTCTACCTAGGTGTGCTTTGCCAAAGTATTTAACCAAAGAGCTTCAGATGCATGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGGTCAGGTTTTACACCCAGGAAATTGTATTTTTTCGACAGGACCTACTTTATAGAATGCGTCGTTCCTGTCTTATACCACCTTCTATAGAAGAAACGAGTGATCTTTTTGAGCATCTTGTTGCTACCATAACTCATCAAAGTCATCTCTGCCCTCTTCCTCTGGTTGTTCAACCAGTTAGCTGGAATTATGATCATTGTCTCCATCTTTTTCCAACTCCTCATGTGATAGTTCTGGGGGATACAAGTAAGCAACAGGCATTCAAATACAGAGGAATCACTTGCTTCAATCCTGGTTCTTTCACAAATGACAACACTTTTGCGGCTTATCGTCCGTGCAATCAAGAAGTTGAATTATTAGCACCTTTTAAATCATGA 1743 40.91 MNLMCLRRKVYNKLNIGGYIIKLDALNEIISFASGFPGSEGEAVDLVLASLNHQSCTTTFYFHTAIVTSSQQFTSFFLVDNFFVFVAVAVQSLILDSDVVHRVVSILASDEVGKESLDTITSTSALCIINAFDISKFRYNPIKKIFHLHTGNLPYHGDGNAKAALYRDRFLLLSQLLSRNQHFSKPAFDTSMSHFRSCEISPIQSLVGQGGRKWVMGLISQMEDGHFYLEDFTASVEINLTNAISFTDIFYSVEKSELHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSLKFLAGQDFFGGGALTKEETFRLADLEKRAVNDMFVVLSDIWLDSEEAMGKLETVLDSFENVEVVPSLFVLMGNFCSRPCNLAFNSFSSLRLQFGMLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTKELQMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSIEETSDLFEHLVATITHQSHLCPLPLVVQPVSWNYDHCLHLFPTPHVIVLGDTSKQQAFKYRGITCFNPGSFTNDNTFAAYRPCNQEVELLAPFKS 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 42751324 42755335 - Lag0036260.1 Lac3g2732 603154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g2732 580 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 6 574 IPR016266 GO:0003677(InterPro)|GO:0006261(PANTHER)|GO:0006261(InterPro)|GO:0008622(InterPro)|GO:0008622(PANTHER)|GO:0042276(PANTHER)
Lac3g2732 580 PIRSF DNA_pol_epsilon_2 1 577 IPR016266 GO:0003677(InterPro)|GO:0006261(InterPro)|GO:0008622(InterPro)
Lac3g2732 580 Gene3D - 343 572 - -
Lac3g2732 580 Pfam DNA polymerase alpha/epsilon subunit B 335 540 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g2732 Lac-Chr3:42751324 Lac4g1082 Lac-Chr4:26497592 7.40E-165 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g2732 K02325 - csv:101207444 853.203