Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g2794 ATGGGTTGTGTTGCGAAGTGCGTTTTCATGATTGTTGTCTTCATGTCGATGCCTTTTCCATCGCAGAACTCCCACATTTTGATTGCTAACTCACTGTTGAATGCAGCAGAGAGCTTCAATGTTAAAGAGCTTGAGAGAGTTTCAGGGAATGATGAGAGTGGAGGAGATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGCTTACAATTGGGAAATCAAAGCCCATCAGATCTTTCGCCTTCGCCGTCGCCATCGCCATCTCCATCACCGGCCGCCATTGCTCCATCTCCTGTTCCTGTGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAGCTTCGCTTGCACAAGAGCCGACCAGCTTACAAAGCTAAAAGACAAGATGCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCCGCAGGATTCACCATTTTGATATGCGCTATTGCTGCCTTTTGGGTCTGCAAGAAGTTCAAAAGTCGGAGAGAGGAACCTACAGAGAAGCTTTCTAAGAAGAGTGAAACAGGAGAGAAGACAGCTGGACCAAAATCTGGCCTTGATCTGTTCGATCTCAGTATGCTTGGAATGGATGTTGAAGAACAGACGCAAACTTCTGTAAGGGAAAAGGAGTTGTCAGTTCATAAAGAGGGGGAAAGGGGCCAAGAGATGTTGGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAACGATGTATGTTAATGAGGAAGATGATAGAAAATCAATACAATGTGAATCTGATGGAGCTGATTCTTCATCTGGGGAGAGAGTCACTCCTGTTAAATCTTGTTCGTCTGATGATGAGGAATCGTTCCATTCTTGTGGGGATTCCAATTTATCGAATGTTCGCCTTTCAAATGCTTCGGAATCTTCTTCTGCTAATGTGATAACAAATTCTACTTGTTCAGTGCCAATTGTGAACTTATCAAGTAAATTGGAAACACAATGTGATGAACCTAACAAACCATTAACTTCTGATCAGTTGCATCTTACCCCTTCTCCTTGTAACTCAGAACTCAAAATGCAGATGGTTTCACATTCTGTAGGTTGCCAAAACCGAAAGAATGTCCCATCTCTATCTCCCCCTCCCCCTCCACCACCTCCGCCGCCACCGCCACCTCCAGTCACTGATCGCAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCTACCTCCTCTTCTGCATTGTTAAGATCGTCATCTCCTGCAATGTCAGATTCTTCTTCGCTATCTCAAATACCATGGAACGATCTGCCATCACCTCCAAATGCTCCTAAACCTTCATTACCATCATCTGCTATTCCTCCACCCCCTTGTCCACCACCAAGTTTGAAAGCAAACGCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAACGAGGGAAATTCACGGCCGAAACTTAAGCCCCTGCATTGGGACAAAGTAAGAGCTGCACCAGATCGAACAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAGATGATCGAGTCACTATTTGGCTACAACCAACAAGATTCAATGAAGAATGGTGATTCTAGCAACAAAAGCCCTTCTCCAAGCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACTATACTCTTAAAAGCCCTGAATCTCTCAACAGAACAAATTTGTGAAGCCATAGAACAAGGGACCGGGTTGCGTTTAAGACAACTTGAAGCACTGGTGAAGATGATACCAACCCAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATTGGGGTGTACAGAGAAATTTGTCATACAAATTCTGAGAATACCATTCGCCTTCCAACGTGTAGAAGCCATGCTTTACAGAGAAACATTTGAAGATGAAGTGAACCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCCTGCAAGGAACTAAGATCCAGCAGGCTCTTCCTGAAACTACTCGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCATTCAAACTAGACGCACTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGCAAAACCTCCCTACTCCACTTCGTCGTCCAAGAAATGATCCGATCAGAAGGAATCCGAGTCTCCGGAAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGACTACCGAAGAATGGGATTAGACCTCGTCTCCGGCCTGAGCACCGAACTGCACAACGTGAAGCGAGCGGCGACGATCGATCTGAAAGTTCTCGCGAGCTCGGCGGCGAATCTGAACGACGGAATGGCGAAGCTGCAGCAACTGGTGGTGAAGGAGTTGTGTGCGGATGAAGGGAGCGGGAACTTCGTGGGCGCCATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGTGGAGGTGAGGAAGGACGAAGAAGGAGTAATGGCGAGCGTGAGGGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAGGAGACGAATCCGCTGAGGATTTTCGTGATTGTGAGAGATTTTTTGGGAATTCTGGACAATGTGTGTAAGAGCTTCAAGATTGGAAGTTGA 2700 45.78 MGCVAKCVFMIVVFMSMPFPSQNSHILIANSLLNAAESFNVKELERVSGNDESGGDEPFILERVRALLGLKSLQLGNQSPSDLSPSPSPSPSPSPAAIAPSPVPVAAHRVHIHEHSHPHQLRLHKSRPAYKAKRQDAREGRVRKILVAVLVSAGFTILICAIAAFWVCKKFKSRREEPTEKLSKKSETGEKTAGPKSGLDLFDLSMLGMDVEEQTQTSVREKELSVHKEGERGQEMLDSEFDNVSVSSTKETMYVNEEDDRKSIQCESDGADSSSGERVTPVKSCSSDDEESFHSCGDSNLSNVRLSNASESSSANVITNSTCSVPIVNLSSKLETQCDEPNKPLTSDQLHLTPSPCNSELKMQMVSHSVGCQNRKNVPSLSPPPPPPPPPPPPPPVTDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPPNAPKPSLPSSAIPPPPCPPPSLKANAYSFKTPPPPPSKLPQFMAFGNEGNSRPKLKPLHWDKVRAAPDRTMVWDKLRWSSFELDEEMIESLFGYNQQDSMKNGDSSNKSPSPSKHILEAKRLQNLTILLKALNLSTEQICEAIEQGTGLRLRQLEALVKMIPTQEEEAKLLSYEGDIGELGCTEKFVIQILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVLASSAANLNDGMAKLQQLVVKELCADEGSGNFVGAMKGFLSYVKKTMVEVRKDEEGVMASVREITEYFHGNVSKEETNPLRIFVIVRDFLGILDNVCKSFKIGS 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 44066133 44069427 + Lag0036322.1 Lac3g2794 603216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g2794 899 MobiDBLite consensus disorder prediction 215 238 - -
Lac3g2794 899 SUPERFAMILY Formin homology 2 domain (FH2 domain) 503 893 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 400 440 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 373 483 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 441 467 - -
Lac3g2794 899 Pfam Formin Homology 2 Domain 494 888 IPR015425 -
Lac3g2794 899 MobiDBLite consensus disorder prediction 114 129 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 268 282 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 379 399 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 177 191 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 77 100 - -
Lac3g2794 899 Gene3D Formin, FH2 domain 488 896 IPR042201 -
Lac3g2794 899 MobiDBLite consensus disorder prediction 177 198 - -
Lac3g2794 899 ProSiteProfiles Formin homology-2 (FH2) domain profile. 490 899 IPR015425 -
Lac3g2794 899 MobiDBLite consensus disorder prediction 253 267 - -
Lac3g2794 899 Coils Coil 651 671 - -
Lac3g2794 899 PANTHER FORMIN-RELATED 62 895 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lac3g2794 899 SMART it6_source 490 897 IPR015425 -
Lac3g2794 899 MobiDBLite consensus disorder prediction 215 301 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 114 135 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 84 100 - -
Lac3g2794 899 MobiDBLite consensus disorder prediction 338 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1726 Lac-Chr13:19549443 Lac3g2794 Lac-Chr3:44066133 4.10E-104 dispersed
Lac3g2794 Lac-Chr3:44066133 Lac9g2080 Lac-Chr9:40406557 4.60E-97 dispersed
Lac3g2794 Lac-Chr3:44066133 Lac9g1078 Lac-Chr9:25485814 5.80E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g2794 K28090 - csv:101208374 1326.61