Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g3011 ATGAGATCAAATCTCATTCGCCTTTGTGGCCAAGCTGAGTCCCTTTTGGAGTCCCATTTCTCTGATCTCTTAGCCAAATTTGATTCCCCTCTTCACCATCTCCATGTCTTCCCTTACTTCTCTAATTACCTCAAACTTAGCCTCCTTGAATACTCCATCCTCCGCCGCCACTTCCCCGCCGTCCCCTCCGCCGTTGCCTTTGTCGGCTCCGGCCCTCTTCCTTTTACGTCCATCGTCCTCGCCACCCGCCACCTCACCGCCACTACCTTCCACAATTACGATCTCGACCCGCTTGCTAATTCCCAGGCGTCGAATTTGGTATCGTCGGATCCGGACTTGAAGACGAGGATGGTTTTTCACACGTGCGACATCGTGAAGGTGACAGAGGAGCTGAAACAGTACGAGGTAGTGTTTTTGGCAGCTCTTGTGGGAATGGAGAAAGAGGAGAAATTGAGAGTGATTGAGCATTTGTCTGAGTTCATGTCGGAAGGGGCTTATTTGATGGTGAGAAGTGCTCATGGAGGAAGGGCTTTTCTTTATCCTGTGGTTGAGGATTGTGATTTGGTAGGGTTTGAGGTTCTATCTGTGTTTCATCCCACCGACGAAGTTATAAACTCCGTTATACTCGCACGAAAAAAGACGAGATTCGAGGACGAGGACGAGGACGAGAACGAGACCGACGGTTGTTGTTTGTCTGTTAATTCAGACAAACAAGAGGAAGATGAAAATGAGAAGGTAATGATTAGTAGCGGTATTGAAAATGGTGTTGTGCATAATAATAATAATAATAAAAAATGTTCTGAGATTCAAAGCTTCAATAATCATGGAGGTATGATAGAGGAATTGGCCATGGAAGCTGAGTAA 864 46.41 MRSNLIRLCGQAESLLESHFSDLLAKFDSPLHHLHVFPYFSNYLKLSLLEYSILRRHFPAVPSAVAFVGSGPLPFTSIVLATRHLTATTFHNYDLDPLANSQASNLVSSDPDLKTRMVFHTCDIVKVTEELKQYEVVFLAALVGMEKEEKLRVIEHLSEFMSEGAYLMVRSAHGGRAFLYPVVEDCDLVGFEVLSVFHPTDEVINSVILARKKTRFEDEDEDENETDGCCLSVNSDKQEEDENEKVMISSGIENGVVHNNNNNKKCSEIQSFNNHGGMIEELAMEAE 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 48185302 48186504 + Lag0036539.1 Lac3g3011 603433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g3011 287 Gene3D Vaccinia Virus protein VP39 1 214 IPR029063 -
Lac3g3011 287 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 217 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Lac3g3011 287 Pfam Nicotianamine synthase protein 1 214 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Lac3g3011 287 PANTHER NICOTIANAMINE SYNTHASE 3 1 234 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Lac3g3011 287 MobiDBLite consensus disorder prediction 216 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0308 Lac-Chr3:2184560 Lac3g3011 Lac-Chr3:48185302 1.10E-65 dispersed
Lac3g3011 Lac-Chr3:48185302 Lac6g2538 Lac-Chr6:43167758 1.10E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g3011 K05953 - csv:101218907 440.269