Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac3g3065 | ATGGATTATCGGGGTTATAGCAGTAGACTGGAAACAAACAACCCGAATAAAGGCTATGCTCAGGAGCAGGAATCTCTTGCTGATGACTTTATAGAGGATTTTCGCCTGCCCATCAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAGGCATCATTGGACACACAATTAACTTCATCGAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTATTGAGCCGATAAAATCTGGAATTAGAGATCCCAAACTAGGCATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAAGAAAATATCCAGAGGAAAAAACTTGATGTTGAGGTGGAAGAGACAGAGGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCACAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTACAAGCAGCCGTGATGACAGAAACAAGCGGGAACAGCAACGTGAGGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGAAAGAAGCAGCAGCAGATGCTGGAGCAACAAGAAAGATCAGCCGATGCTCCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGAAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCAAAGAACATTTTTGGTGGAGTCACAAAGAAACCAAAAGTAGCCACTGTAGCTTCAGTTTTTGGAAATGATAGTGACGATGAATAA | 900 | 41.0 | MDYRGYSSRLETNNPNKGYAQEQESLADDFIEDFRLPINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGTSSRDDRNKREQQREEREMAKFAQIADARKKQQQMLEQQERSADAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGVTKKPKVATVASVFGNDSDDE | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 48964027 | 48970404 | - | Lag0036593.1 | Lac3g3065 | 603487 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac3g3065 | 299 | MobiDBLite | consensus disorder prediction | 7 | 21 | - | - | |
Lac3g3065 | 299 | Pfam | G-patch domain | 63 | 103 | IPR000467 | GO:0003676(InterPro) | |
Lac3g3065 | 299 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 159 | 181 | IPR013087 | - | |
Lac3g3065 | 299 | PANTHER | FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED | 1 | 299 | - | - | |
Lac3g3065 | 299 | MobiDBLite | consensus disorder prediction | 191 | 220 | - | - | |
Lac3g3065 | 299 | MobiDBLite | consensus disorder prediction | 191 | 278 | - | - | |
Lac3g3065 | 299 | SMART | G-patch_5 | 60 | 105 | IPR000467 | GO:0003676(InterPro) | |
Lac3g3065 | 299 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lac3g3065 | 299 | ProSiteProfiles | G-patch domain profile. | 62 | 107 | IPR000467 | GO:0003676(InterPro) | |
Lac3g3065 | 299 | SUPERFAMILY | beta-beta-alpha zinc fingers | 138 | 190 | IPR036236 | - | |
Lac3g3065 | 299 | MobiDBLite | consensus disorder prediction | 233 | 274 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g0256 | Lac-Chr11:2567835 | Lac3g3065 | Lac-Chr3:48964027 | 4.70E-06 | transposed | |
Lac3g3065 | Lac-Chr3:48964027 | Lac4g0225 | Lac-Chr4:4768412 | 6.00E-09 | wgd |
Pathway information
