Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g3083 ATGCCCAAGCTTTTGCTCCTTGGCTTTCTCTTAACATTGGCTTTCACCAAATGGGTTCATGCCTTTCACCCTTATAATCTCTCTGATTCATCTCTCTTCGATTCTTATGACACTTCCTTTGCTGCCACCATTAATCCTCTCATGGTGGGACTCACTCTCATTCATGGAGCTGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATTTGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGGAAAACAACCAGACGTGGATCGTCAAGATTTATGGAGAAGCAAATACCATTTACAGGAATTCTGAGCAACAAAGCTGAAGAAAATCCTGATTTTTTCAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACAGGGGATTCTGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCAATGGAAGCATTGAAGGCCGAGGGAATGCGATTTGCAAATCAGGCCTTGCTTTCTGGCTGCTCTGCTGGAGGTTTGGCATCTATTCTACACTGTGATGAGTTTGGAGACTTATTTCCAAGAACTACTAAAGTGAAATGTCTGAGTGATGCTGGACTATTCCTTGACGTGACTGATATATCTGGAGGACACTATATTAGGAACCTATTTGGTGGTGTAGTGGGCTTGCAGGGTGCAGGAAGGAATCTGCCGTCCATTTGTACTAACCATCTAGATCCAACTTCGTGTTTCTTCCCACAAAATGTAATTGCTGGAATTAGAACCCCACTGTTTCTTGTCAATGCAGCATATGATTCCTGGCAGATACAATCTAGTATAGCCCCACCTTCTCTGGATCCGGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAGCCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTCAGGGATTTCTCAAAATCTTATAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGATACATGGTTTGGTGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCCCTGGCTGTTGGAGATTGGTACTTCGACCGAGCAGCGGTGAAAGCGATTGATTGTCCCTATCCTTGCGACAGGACTTGCCACAATCTGGTTTTTAGAAGCGGTTAG 1245 43.61 MPKLLLLGFLLTLAFTKWVHAFHPYNLSDSSLFDSYDTSFAATINPLMVGLTLIHGADAKQAVCLDGTLPGYHLHRGFGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALKAEGMRFANQALLSGCSAGGLASILHCDEFGDLFPRTTKVKCLSDAGLFLDVTDISGGHYIRNLFGGVVGLQGAGRNLPSICTNHLDPTSCFFPQNVIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVRDFSKSYKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHNLVFRSG 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 49273258 49277828 - Lag0036611.1 Lac3g3083 603505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g3083 414 PANTHER NOTUM-RELATED 38 409 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Lac3g3083 414 Pfam Pectinacetylesterase 45 391 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0008 Lac-Chr13:136284 Lac3g3083 Lac-Chr3:49273258 2.70E-55 dispersed
Lac13g0010 Lac-Chr13:142534 Lac3g3083 Lac-Chr3:49273258 5.90E-115 dispersed
Lac1g2044 Lac-Chr1:41980354 Lac3g3083 Lac-Chr3:49273258 3.60E-124 dispersed
Lac3g3083 Lac-Chr3:49273258 Lac5g2285 Lac-Chr5:41537541 1.60E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g3083 K19882 - csv:101218273 815.068