Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac3g3108 ATGACTTTTCACATTCTAACGTCACTTCTTCTTCACGCGGTTTCCGTTTCAGCAGCTCAGTGTCGTGTCGCCGCCTGGTCTCTCGACTCTCTCCCATTCAATGCTGTCGCCGCCGCCGTCCTTCTTCTGCTCGTGCCGCCGCCGCCGTCGTCTTTCTTCCGTTCGTTCCGCCGCAACCTCCTTCGATTTTCTACCCCCTCGCTGTTACTGGTATTTTCCCAATCTCCATACGCCTCGTCTCTCCCATTCACTGCTGCCGCCGCCGTCGTCTTTCTTCTGCTCGTGCCGCCGCGCCGTCGTCTCTCTTCCGTTCGTTCCGCCGCAGCCTCCTTCGATTTTCTACCCCTCGCTGTTACTGTGCTTTGCTTTGCGTATGCTAAGGTGAAGGCAGCAACAATTTCTGCTGCCCTGACACATGTTCAACAAGAAATGGCTGGTCAATCGGATCCTCACCTGACCCTATTTTCTGCAGAAGAGGTCGAGTTTGTCGCCGAAGACGAAATGGTGGAGATTGTTCCTAATATGAGAATGGAACCTCTGAATTTGATTTGTGGGAATTATGGTCCGTTCTATCCCCAAATAGCAACTGAAGTTCCTTTCTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCTGAGTGGATGTCAGTGGAAAAGTTGACACAAATTTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAAATTCTACCATTCCATTATGTGGAAATAGCAAAACTTCTGTTTGACCATGCACGAGATGACGTTTCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATTAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATTGATACACGCACATCTGCAGTAAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCATTTGTCGGTAGAGCGTTGCAGGCAATTTACAAGCATGGAAATCCGGAGTTGGTTCCAGATCAAGAAAGGACGGCCGGTGTGCAGCCACAAGGACACGATCACGGACAAAGACGACCTCTTCGGAGACGGTAG 1065 48.83 MTFHILTSLLLHAVSVSAAQCRVAAWSLDSLPFNAVAAAVLLLLVPPPPSSFFRSFRRNLLRFSTPSLLLVFSQSPYASSLPFTAAAAVVFLLLVPPRRRLSSVRSAAASFDFLPLAVTVLCFAYAKVKAATISAALTHVQQEMAGQSDPHLTLFSAEEVEFVAEDEMVEIVPNMRMEPLNLICGNYGPFYPQIATEVPFWLAIALKKRGKCAIRPPEWMSVEKLTQILEAERESQGSFQILPFHYVEIAKLLFDHARDDVSDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPELVPDQERTAGVQPQGHDHGQRRPLRRR 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 49820493 49828193 + Lag0036636.1 Lac3g3108 603530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac3g3108 354 Gene3D - 155 220 - -
Lac3g3108 354 Gene3D - 221 334 - -
Lac3g3108 354 CDD GINS_A_psf2 209 325 - -
Lac3g3108 354 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 144 337 IPR007257 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)
Lac3g3108 354 Pfam GINS complex protein helical bundle domain 214 313 IPR021151 -
Lac3g3108 354 CDD GINS_B_Psf2 156 217 - -
Lac3g3108 354 FunFam DNA replication complex GINS protein PSF2 221 336 - -
Lac3g3108 354 SUPERFAMILY PriA/YqbF domain 155 214 - -
Lac3g3108 354 MobiDBLite consensus disorder prediction 328 354 - -
Lac3g3108 354 SUPERFAMILY GINS helical bundle-like 216 325 IPR036224 -
Lac3g3108 354 FunFam DNA replication complex GINS protein PSF2 155 220 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac3g3108 K10733 - csv:101212053 383.645