Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac4g0070 | ATGGCTTCGGATCCGAAGGTTCATCTATTCGAAGAAGTGGCGAAGCACAACAAAACCAAAGATTGTTGGCTTATAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGACGATCATCCCGGAGGTGATGAAGTACTATTGTCTGCAACTGGGAAAGATGCCACGAACGATTTCGAAGATGTTGGGCACAGCGATTCGGCAAGAGAAATGATGGACAAGTATTACATCGGAGAAATTGATCCTTCGACAGTTCCTTTGAAGAAGATTTTCATTCCATCACAACAAACCCAGTACAACCCAGATAAGACACCTGAGTTTGTGATTAAGATCTTGCAGTTTCTGGTTCCCATATTGATTTTGGGTTTGGCATTTGCTGTTCGACACTACACCAAGAATGAATGA | 405 | 42.22 | MASDPKVHLFEEVAKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIFIPSQQTQYNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1259308 | 1261043 | - | Lag0000190.1 | Lac4g0070 | 603602 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac4g0070 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
Lac4g0070 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Lac4g0070 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Lac4g0070 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Lac4g0070 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Lac4g0070 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Lac4g0070 | 134 | PANTHER | CYTOCHROME B5 | 6 | 132 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Lac4g0070 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Lac4g0070 | 134 | Gene3D | - | 1 | 86 | IPR036400 | - | |
Lac4g0070 | 134 | FunFam | Cytochrome b5 type B | 2 | 85 | - | - | |
Lac4g0070 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 11 | 80 | IPR001199 | - | |
Lac4g0070 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 4 | 87 | IPR036400 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac11g2510 | Lac-Chr11:41219714 | Lac4g0070 | Lac-Chr4:1259308 | 4.30E-38 | dispersed | |
Lac12g1295 | Lac-Chr12:19369129 | Lac4g0070 | Lac-Chr4:1259308 | 1.10E-31 | dispersed | |
Lac12g1592 | Lac-Chr12:30293377 | Lac4g0070 | Lac-Chr4:1259308 | 8.90E-09 | dispersed | |
Lac12g2057 | Lac-Chr12:37681232 | Lac4g0070 | Lac-Chr4:1259308 | 1.40E-47 | dispersed | |
Lac4g0070 | Lac-Chr4:1259308 | Lac7g0103 | Lac-Chr7:870251 | 5.00E-40 | dispersed | |
Lac4g0070 | Lac-Chr4:1259308 | Lac7g0465 | Lac-Chr7:3688907 | 3.70E-51 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac4g0070 | K23490 | - | csv:101207109 | 272.707 |