Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac4g0343 | ATGGATTTTCCCATTTTCAGATTACCATCCCTCTTTGCCCTTCTCGCCATTTTTCTTGCCTTCTCCAGCTTTCTTGCTTCAACAGAAGCCTATGATCCACTTGATCCAAATGGAAACATTACTGTCAAATGGGATGTTATAAACTGGACTCCTGATGGCTATGTTGCTGTTGTTACTTTGTATAATTTCCAACAATATCGTCATATTCAAGCACCGGGATGGTCTCTGCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAGCATGTTGGGTGGCCAAGCAACCGAGCAAGAGGGATCCAACCATTGTCGATCTATTGCCGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAAGGGTGGAGTTCTCAACTCCTGGGTGCAAGATCCAGTTACTGCAGTGAGCTCATTTCAGCTCAGTGTTGGTGCAGCCGGAACCTCGAATAAAACTGTCAGATTGCCAAAGAACTTCACCTTAAAAGCACCTGGGCCTGGATATACTTGTGGACCTGCTAAAATTGTTAAACCGAGCAGATTCATTTCCCCCGACAAACGAAGAGTTACGCAGGCCTTGATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCCCAAAAAACTCCAACCTGCTGTGTCTCGCTGTCATCGTTTTACAATGACACCATTGTTTCTTGCCCAAAATGCTCTTGTGGCTGCCAAGCAATCTGA | 714 | 44.68 | MDFPIFRLPSLFALLAIFLAFSSFLASTEAYDPLDPNGNITVKWDVINWTPDGYVAVVTLYNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGGQATEQEGSNHCRSIAGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSRFISPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQAI | 237 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7894194 | 7896023 | - | Lag0000463.1 | Lac4g0343 | 603875 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac4g0343 | 237 | PANTHER | PROTEIN COBRA | 19 | 235 | IPR006918 | GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER) | |
| Lac4g0343 | 237 | Pfam | COBRA-like protein | 54 | 202 | IPR006918 | GO:0010215(InterPro)|GO:0016020(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac4g0343 | Lac-Chr4:7894194 | Lac8g2760 | Lac-Chr8:44907949 | 4.60E-97 | dispersed | |
| Lac4g0341 | Lac-Chr4:7891089 | Lac4g0343 | Lac-Chr4:7894194 | 2.90E-89 | proximal |
Pathway information