Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g0500 ATGTCGCCTGTTGATTCTTCACGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCAGAACGGTATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTTGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCGTGGAGGATTATATCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAACGAGGACCATGTTGCAATTATCAAGGAGTACCGAGGCAAAATCGAAACCGAACTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCGGCCTCATCTGCCGAATCAAAGGTGTTTTATCTCAAAATGAAAGGTGACTACCACAGGTACCTGGCTGAGTTTAAGACTGGCGCTGAAAGGAAAGAAGCAGCTGAGAGCACATTATTAGCCTACAAGTCTGCTCAGGATATTGCTCTTGCTGAATTGGCTCCTACTCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGCGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATGTTGGGGATGAAGCTGGCGATGAGATTAAGGAAGCATCGAAACGTGAATCAGGAGAGGGACATGGACAGTAG 792 46.59 MSPVDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDVGDEAGDEIKEASKRESGEGHGQ 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11554483 11556072 - Lag0000620.1 Lac4g0500 604032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g0500 263 SMART 1433_4 8 251 IPR023410 -
Lac4g0500 263 PIRSF 14-3-3 3 250 IPR000308 -
Lac4g0500 263 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Lac4g0500 263 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Lac4g0500 263 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Lac4g0500 263 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Lac4g0500 263 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Lac4g0500 263 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Lac4g0500 263 Pfam 14-3-3 protein 14 238 IPR023410 -
Lac4g0500 263 Coils Coil 14 34 - -
Lac4g0500 263 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Lac4g0500 263 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Lac4g0500 263 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Lac4g0500 263 Gene3D - 2 251 IPR036815 -
Lac4g0500 263 FunFam 14-3-3 protein epsilon 4 251 - -
Lac4g0500 263 PANTHER 14-3-3 PROTEIN 7 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0741 Lac-Chr2:5702076 Lac4g0500 Lac-Chr4:11554483 2.80E-116 dispersed
Lac4g0500 Lac-Chr4:11554483 Lac6g1029 Lac-Chr6:9402343 1.40E-99 dispersed
Lac4g0500 Lac-Chr4:11554483 Lac6g0913 Lac-Chr6:8083447 4.00E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g0500 K06630 - csv:101222068 507.294