Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1082 ATGATCGCAAATTTCATCCTATTGCACACAGGAAACCTTCCAGTACATGGGGATGCTTCTGCTAAAGCTGCTTTGTATAGAGATAGGTTTCTCTTGCTTTCCCAAAGGCTCTCCCGGATCAACATTTCTCCAAACCCGCTTTTGACACAGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAGTCTCTGGTGGGGCAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAGATGGAGGATGGTCACTTTTACTTGGAGGACTTTACTGCCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGCATTTTTCAGGTGATTACATGTGGATTTCCTCCATTAGAGGACAGGGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTGTTCTTTCTAAGGAGGAGACTCTCAGGCTTGCAGATCTTGAAAAGAGAGCTGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATTCTTGATGGTTTTGAGAATGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTCAATTCTTTCTCAAGTCTCAGGCCATCAACCGTTCTACCTAGGTGTGCTTTGCCAAAGTATTTAACCGAAGAGCTTCAGATGCACGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGGTTAGGTTTTACACCCAGGAAATTGTATTTTTTCGACAGGACTTACTTTATAGAATGCGTCGATCCTGTCTCATACCACCTTCTACAGAAGAAACAAGTGATCCTTTTGAGCATCTTGTTGCTACCATAACTCATCAAAGTCATCTCTGCCCTCTTCCTTTGGTTATTCAACCAATTATCTGGAATTATGACCACTGTCTTCATCTTTACCCAACTCCTCATGTGATAGTTCTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTCAATCCTGGTTCTTTCACAAATGACAGCACTTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAATTATCTGCGTTGTAA 1143 42.78 MIANFILLHTGNLPVHGDASAKAALYRDRFLLLSQRLSRINISPNPLLTQACLILEVVRFLLFSLWWGNREEMGHGSDLSDGGWSLLLGGLYCHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSLKLLAGQDFFGGGVLSKEETLRLADLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFNSFSSLRPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26497592 26501322 + Lag0001202.1 Lac4g1082 604614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1082 380 Pfam DNA polymerase alpha/epsilon subunit B 228 343 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Lac4g1082 380 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 227 380 IPR016266 GO:0003677(InterPro)|GO:0006261(PANTHER)|GO:0006261(InterPro)|GO:0008622(InterPro)|GO:0008622(PANTHER)|GO:0042276(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g2732 Lac-Chr3:42751324 Lac4g1082 Lac-Chr4:26497592 7.40E-165 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1082 K02325 - csv:101207444 590.497