Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1364 ATGTGGCTGCAAAAAGGAAACAGTGTCAATGGCGGGAAGAAGGGAGGAGCAGCAGGAGGCGGAGGCGGAGGCGGAGGCAATGGGCTGGTGGCTGTCGGCATTGACAGGGAAAAAGGAAGCCAAAATGCTCTCAGATGGGCCGCCGAGAATTTGCTGGGAAAGGGCCAAACTGTGATTTTAATCCATGTGGTTCAGAGACCTTCAAGTGCGGCTGCTTCTTTGATTGGTGGAGCCATTATCTGTAATGCCGATGGCAGTTTCACGGATGATTCCCCTCGTAAACAGCGGCTCGAGATGCAGACTAGAGACATTTTTCTCACCTTCCATTGCTATTGTACTCGCAAGGATATTCAATGTCTTGATGTTATATTGGAAGACACCGACGTGGTGAAAGCATTAACGGAATACGTCTCCTATGCTGCAATCGAAAACTTGGTGCTTGGGGCGCCGTCGAAACATGGATTCATTAGGTTTAAGTCGTCAAGCATGGGGAGTCATGTGTCGAAAGGGGCACCGGATTTCTGCACTGTACATGTTATCTCGAAGGGGAAGGTGTCATCGGTGAAACATGCCACTCGTTCGGCTCCCTTTTCTTCCCCTCTACTAGACCATGTACAGAAGTTATCTAAGCCGATCGTGAAGGGACCAACGATCACTCCTCGACATAAGTTCAATTTAAGAGATAGGACATCATTCAAGCCTCGCAGTTATCAAGATGAAACAACCAAGTCATCTTACTCTCATGGTGGAGAGAGAACTTCTATTTCCAAATTTAGTGGAGGGTTCTCTGAGTCTGAATCCGATATATCCTTCATAAGCTCCGGTAGACCAAGCACTGAGCGTACTTCTTCTGTTGCATTTGACTACTCTGATTCAGCCCCCTCACGATTTTCGACTAGCTCAGAACAAAGCTTTGCATCTCTACCATTTAAACCAAAATGGACAGACCTCAGTCATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACATCATGTTCATGGTCATCTCAGAACGTGGATGAAGCAGAACTTGAAATGAGGAGGCTGAAGCTAGAGCTTAAACAAACCATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACTGCAAAGCAGAAGGCAATGGAACTAAATAATTGGAGACGTGAAGAAGAACAAAAACTAGAAGAGGCACGACTCGCTCAAGAAGCTGCAATGGCCATTGCAGAGCAGGAGAGAGCGAGATGCCGAGCAGCAATGGAAGCAGCTGATGCAGCTAAGAGAATTGCGGAGTTTGAATCACATAAAAGAGCAAATCTAGAGATGAAAGCACTTAAAGAAGCAGAGGAAATGCAGAAAGCATTGAAAAATCTTGCTCAGAGTGACATTAGATACAGGAGATATTCAATTGATGAGGTTGAAGCTGCAACAGAACATTTTGCACCATCTCGAAAGATTGGGGAAGGAGGTTATGGACCTGTCTTTCAATGTCGTCTTGATCACACATCGGTTGCAGTCAAGGTTTTGCGTCCCGATGCGACTCAAGGAAGGACACAGTTTCAGCAAGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTTGGAGCATGCCCAGAATATGGCATTCTAGTGTACGAGTACATGTCGAACGGAAGTTTGGAGGATCGACTCTTCCGAAAGGGGAACACCCCTGTTATTCCTTGGCAATATAGGTTTCGAATTGCTGCCGAGATTGCTACCGGCCTTCTGTTTCTCCACCAGACAAAGCCAGAACCGTTGGTGCACCGTGACCTCAAGCCAGCAAACATTTTGCTAGACCACAACTATGTTTGCAAGATAAGCGACGTCGGTTTAGCTAGACTTCTACCTGCTGTGGCTGAAAATGTAACACAATGCTGCATGACTTCGGCCGCGGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGCTGCTTCAACTACTTACAGCCAAGCCGGCCATGGGGTTGGCTCACCATGTTGCTCGTTCTATTGAGAAGGGCACTTTTGCAAATATGCTGGACCCAGCTGTGGCTGATTGGCCAGTGGAACAAGCCCTTTCCTTTGCAAAATTAGCACTCCAATGTGCAGAACTTAGACGAAAAGACAGACCAGATCTTGGCATTGTTGTGTTGCCAGAACTTAACAAATTGAGAGAATTTGGTGAGGAGAAAATGGAGCAAATTGCATCCAGGGATAGCAGTGGATCTTTGAGCGGTTTTAGCCATGCCTCAACGGAGCAGTCGAAACCCTTCTCTCTCCTTCACCTTATCTCTTCATCTTCCCCTCCTATCGTCGGAGCCTCCTCCCGCCGCCGTCGGAGTCTCCCTCGCCGCCGAAGCTTCCCCGCCGGAGCCACCATGGATTTGAAGAGATCTCGAAGAGAAGGAACAGAGCGAGGGACGGTGAGGGCAACGATGGTGTCGAGTTTTCTGTTTGGGGGAAGGTCGTCGAAGGCCACGGGCGAGAGAAAGAAATGGCGGATTTGGGGAGGGAAGGAGTTGAGGACGGAGTGA 2586 47.49 MWLQKGNSVNGGKKGGAAGGGGGGGGNGLVAVGIDREKGSQNALRWAAENLLGKGQTVILIHVVQRPSSAAASLIGGAIICNADGSFTDDSPRKQRLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDVVKALTEYVSYAAIENLVLGAPSKHGFIRFKSSSMGSHVSKGAPDFCTVHVISKGKVSSVKHATRSAPFSSPLLDHVQKLSKPIVKGPTITPRHKFNLRDRTSFKPRSYQDETTKSSYSHGGERTSISKFSGGFSESESDISFISSGRPSTERTSSVAFDYSDSAPSRFSTSSEQSFASLPFKPKWTDLSHLNDFSSVSDESCRTSCSWSSQNVDEAELEMRRLKLELKQTMEMYSTACKEALTAKQKAMELNNWRREEEQKLEEARLAQEAAMAIAEQERARCRAAMEAADAAKRIAEFESHKRANLEMKALKEAEEMQKALKNLAQSDIRYRRYSIDEVEAATEHFAPSRKIGEGGYGPVFQCRLDHTSVAVKVLRPDATQGRTQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQYRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVCKISDVGLARLLPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLLTAKPAMGLAHHVARSIEKGTFANMLDPAVADWPVEQALSFAKLALQCAELRRKDRPDLGIVVLPELNKLREFGEEKMEQIASRDSSGSLSGFSHASTEQSKPFSLLHLISSSSPPIVGASSRRRRSLPRRRSFPAGATMDLKRSRREGTERGTVRATMVSSFLFGGRSSKATGERKKWRIWGGKELRTE 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 31871266 31875800 + Lag0001484.1 Lac4g1364 604896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1364 861 MobiDBLite consensus disorder prediction 786 824 - -
Lac4g1364 861 Pfam Protein kinase domain 479 728 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac4g1364 861 ProSiteProfiles Protein kinase domain profile. 476 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac4g1364 861 CDD STK_N 29 183 - -
Lac4g1364 861 Gene3D Transferase(Phosphotransferase) domain 1 549 760 - -
Lac4g1364 861 Gene3D Phosphorylase Kinase; domain 1 443 548 - -
Lac4g1364 861 Coils Coil 342 362 - -
Lac4g1364 861 MobiDBLite consensus disorder prediction 221 236 - -
Lac4g1364 861 Coils Coil 433 457 - -
Lac4g1364 861 PANTHER OS02G0152300 PROTEIN 30 755 IPR051348 -
Lac4g1364 861 Coils Coil 380 408 - -
Lac4g1364 861 MobiDBLite consensus disorder prediction 1 20 - -
Lac4g1364 861 MobiDBLite consensus disorder prediction 216 283 - -
Lac4g1364 861 FunFam U-box domain-containing protein 51 549 748 - -
Lac4g1364 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac4g1364 861 Pfam Universal stress protein family 30 172 IPR006016 -
Lac4g1364 861 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 448 548 - -
Lac4g1364 861 MobiDBLite consensus disorder prediction 237 283 - -
Lac4g1364 861 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 30 180 - -
Lac4g1364 861 SUPERFAMILY Protein kinase-like (PK-like) 458 732 IPR011009 -
Lac4g1364 861 Gene3D HUPs 29 180 IPR014729 -
Lac4g1364 861 SMART serkin_6 476 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g1364 Lac-Chr4:31871266 Lac6g1163 Lac-Chr6:11055113 5.00E-226 dispersed
Lac4g1364 Lac-Chr4:31871266 Lac2g0696 Lac-Chr2:5260915 2.80E-229 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86125 PF00069 Pkinase 9.20E-41 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1364 - - - 0.0