Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1576 ATGACTTCATCTTCTTCCAAGGATTCAGAACATCCTCAGATTCCCCTGCCACTCAAACCCATCCCCGGCAGCTATGGCTTCTCCATCTTCGGACCCATCAAAGATCGCTACGATTACTTCTACATTCAAGGCAGAGAGAAATTCTTCCGAACTCGAATGGAGAAATATGGCTCCACTGTTTTCCGGGTCAACATGCCGCCGGGCCCCTTCATCTCTTCCGATCCCAGAGTCGTCGTCCTTCTCGACGCCGTCAGCTTTCCGATCCTCTTCGACACCACTAAGGTCGAGAAACGGAACGTTCTCGACGGAACTTACATGCCGTCCTTGAACTTCACCGGCGGAATCCGCACCTGCGCCTTTCTGGACCCGTCGGAAACAGAGCACTCTGTTCTCAAGACCCTGTTCCTCAAATTTCTCGCCTCTCGTCACGATCAGTTCCTTCCTCTGTTCCGGACCTCGGTTTCCGAGATGTTCGATAAGCTCGAAAGGGAATTGGCTGAGAAGAAAGTCGCCAATTTCAACCCCGTCGGCGATGCGGCGTCGTTTGATTTCATTTTCCGCTTGCTCTCCGACCGGAGCCCCGATCAGAAATTCGCCGCCGAGGGACCCGGTTTGGTCGACCGGTGGCTCGCTATGCAGCTCGCTCCGTTGGCCACCGCCGGTCCGCCCAAATTCCTCAGCTGCTTCGAAGATCTCATCATCCATACATTCCGTTTACCCTTCGCACTCGTCAAGAGTGCTTACAGGAAGGTTTACGACCAATTTTACGAGTCGTCGGGTTCGTTTCTAGACGAAGCAGATAAACAGGGGATAGACAGAGAGAAAGCCTGTCACAATTTAGTGTTCCTCGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTATTACCGATTATACTCAACTGGGTCGGATCCGCCGGTGAGGGGCTCCACCGGAAGCTCGCCGGCGAGATCAGAGCCGCCGTGAAGGAAGACGGAGGACTGACATTCGCCGCCTTGGAGAAGATGAGTCTGCTGAAATCCGTCGTGTACGAGGTTCTGAGAATCGACCCGCCGGTGCCGTACCAGTACGCGAAGGCGAAGCAAGACATGGTGATCGAGAGCCACGATTCTTCGTTCAAGATCAAGAAAGGGGAGATGCTTTTTGGGTATCAGCCGATCGCTACTAAAGATCCGAAGGTGTTTGAAAAGCCGGAGGAGTTCGTCGGGGAGAGGTTCGTCGGAGAGAAAGGGGAGAAGCTTTTGAAGTATGTTTACTGGTCGAACGGCCGGGAGACGGAGACGCCGACGGCGGAGAACAAGCAGTGTCCGGCGAGGGATCTGGTGGTGCTCGTGTCCAGAGTAGTTTTGGTGGAACTGTTTCTCCGTTACGACACGTTCGCCGTCGAGGGGACTCGGTCGTCGTTGGGTTGGTCCGTTAAGGTCAAATCGTTGACCAAGGCGACTGCTAAAGGTTAA 1458 54.05 MTSSSSKDSEHPQIPLPLKPIPGSYGFSIFGPIKDRYDYFYIQGREKFFRTRMEKYGSTVFRVNMPPGPFISSDPRVVVLLDAVSFPILFDTTKVEKRNVLDGTYMPSLNFTGGIRTCAFLDPSETEHSVLKTLFLKFLASRHDQFLPLFRTSVSEMFDKLERELAEKKVANFNPVGDAASFDFIFRLLSDRSPDQKFAAEGPGLVDRWLAMQLAPLATAGPPKFLSCFEDLIIHTFRLPFALVKSAYRKVYDQFYESSGSFLDEADKQGIDREKACHNLVFLAGFNAYAGMKVLLPIILNWVGSAGEGLHRKLAGEIRAAVKEDGGLTFAALEKMSLLKSVVYEVLRIDPPVPYQYAKAKQDMVIESHDSSFKIKKGEMLFGYQPIATKDPKVFEKPEEFVGERFVGEKGEKLLKYVYWSNGRETETPTAENKQCPARDLVVLVSRVVLVELFLRYDTFAVEGTRSSLGWSVKVKSLTKATAKG 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34389624 34391165 - Lag0001696.1 Lac4g1576 605108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1576 485 PANTHER CYTOCHROME P450 26 21 457 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Lac4g1576 485 CDD CYP74 50 476 - -
Lac4g1576 485 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1576 485 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1576 485 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1576 485 Gene3D Cytochrome P450 16 485 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1576 485 Pfam Cytochrome P450 312 419 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1576 485 SUPERFAMILY Cytochrome P450 15 466 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1576 485 FunFam Allene oxide synthase, chloroplastic 16 483 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g1576 Lac-Chr4:34389624 Lac4g1577 Lac-Chr4:34406943 6.10E-213 tandem
Lac12g0566 Lac-Chr12:6000830 Lac4g1576 Lac-Chr4:34389624 2.10E-110 transposed
Lac4g1576 Lac-Chr4:34389624 Lac6g0369 Lac-Chr6:3068217 5.10E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1576 K01723 - csv:101211574 838.95