Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1577 ATGGCATCGTCTTCTTCCTCTGAACTTCCTCTGAAACCGATTCCCGGCGGCTATGGCTTCTCCGTCGTCGGTCCGCTCAAAGACCGCTACGACTACTTCTACTTCCAAGGCAAAGACGAATTCTTCCGATCCCGAATGACCAAACACCGCTCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTGCATCTCCTTCGATTCCAGAGTCGTCGTCGTCCTCGACGCCGTCAGTTTTCAGATCCTCTTCGACACCAGTAAAGTCGAAAAACGCAACGTTCTCGACGGAACTTACATGCCCTCCCTCTCCTTCACCGGCGATATTCGCACCTGCGCCTATTTGGACCCGTCGGAAACAGAGCACTCTCTTCTGAAAAAGCTTTTCCTCCGTTTTCTCGCCTCTCGCCACGACAGGTTTATCCCTCTGTTTCGGAACTCCTTGTCGGAGATGTTTATTAAGCTTGAAGATAAACTGGCGGAGAAGAAGAAGGTCGCCGATTTCAACCCGATCAGTGATGCGATGTCGTTCGATTACATGTTCCGGCTGCTCTCCGACGGAATCCCTGATGCGAAATTGGCCGCCGATGGACCTGGGTTGTTCGATAAATGGCTGACCTTCCAGCTCGCTCCATTGGCTTCTGTTGGATTGCCGAAAATCTTTTCAGTTTTTGAAGATCTCGTAATCCACACCATTCCCCTGCCTTTCTTTCTCGTCAAACGAGGTTACAGGAGGCTTTACGACGCGTTTTACTCCTCGTCTGGTTCGTTTCTGGACGAAGCGGAGAAACAGGGGATAGACAGAGAGAAAGCGTGTCACAACTTAGTGTTTCTGGCCGGATTCAACGCGTACGGCGGAATGAAAGTGCTTTTTCCGATTTTGCTCAAGTGGGTCGGCACCGCCGGGGTGGAGCTCCACCGGAAGCTCGCCGACGAGGTCAGAGCCATCGTGAAGGAAGAAGGGGGGCTGACTTTCGCCGCCTTGGAGAAGATGAGTCTGTTGAAATCCGTGGTGTATGAGGCTCTGAGGATCGAGCCGCCGGTGCCGTTCCAGTACGCGAAGGCGAAGGAGGACATGGTGATTCAGAGCCACGATTCGGCATTCAAGATCAAGAAAGGGGAGATGATTTTTGGGTACCAGCCGTTTGCCACAAAAGATCCGAAGGTGTTTGAGAATCCGGAGAAGTTCGTCGGCGATAGGTTCGTCGGAGAAGGGGAGAAGCTTCTGAAGTATGTTTATTGGTCGAACGGGCGGGAGACGGAGGAGCCGACGCCGGAGAACAAGCAGTGTCCAGGGAAGGATCTGGTGGTGCTGATGGGCAGGGTCATTCTGGTGGAATTCTTCCTCCGGTACGACACGTTTTCCGTCGACGTCGCCGAATTGCCGCTCGGCCCGTCGGTCAAGTTCAAGTCCTTGACCAAAGCTACTGTTTGA 1431 53.67 MASSSSSELPLKPIPGGYGFSVVGPLKDRYDYFYFQGKDEFFRSRMTKHRSTVFRANMPPGPCISFDSRVVVVLDAVSFQILFDTSKVEKRNVLDGTYMPSLSFTGDIRTCAYLDPSETEHSLLKKLFLRFLASRHDRFIPLFRNSLSEMFIKLEDKLAEKKKVADFNPISDAMSFDYMFRLLSDGIPDAKLAADGPGLFDKWLTFQLAPLASVGLPKIFSVFEDLVIHTIPLPFFLVKRGYRRLYDAFYSSSGSFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPILLKWVGTAGVELHRKLADEVRAIVKEEGGLTFAALEKMSLLKSVVYEALRIEPPVPFQYAKAKEDMVIQSHDSAFKIKKGEMIFGYQPFATKDPKVFENPEKFVGDRFVGEGEKLLKYVYWSNGRETEEPTPENKQCPGKDLVVLMGRVILVEFFLRYDTFSVDVAELPLGPSVKFKSLTKATV 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34406943 34408466 - Lag0001697.1 Lac4g1577 605109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1577 476 SUPERFAMILY Cytochrome P450 10 458 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1577 476 Pfam Cytochrome P450 303 412 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1577 476 PANTHER CYTOCHROME P450 26 14 450 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Lac4g1577 476 Gene3D Cytochrome P450 5 476 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1577 476 PRINTS E-class P450 group IV signature 383 401 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1577 476 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1577 476 PRINTS E-class P450 group IV signature 330 346 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1577 476 PRINTS E-class P450 group IV signature 367 381 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac4g1577 476 CDD CYP74 43 469 - -
Lac4g1577 476 FunFam Allene oxide synthase, chloroplastic 9 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g1577 Lac-Chr4:34406943 Lac6g0369 Lac-Chr6:3068217 1.40E-145 dispersed
Lac4g1576 Lac-Chr4:34389624 Lac4g1577 Lac-Chr4:34406943 6.10E-213 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1577 K01723 - csv:101211324 817.764