Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1638 ATGGGTATCTTTTCGAAGCAGAAATTTTGGAGAACTGGGGCGACCCACGATGATTCGACGGGTTTAAATGGGGCTCCTGCAGCGAGCAAGAGGAAATGGACCGGTTTCATGCCTCTGTTTGTGGCGATGGTGGTCATAGCAGAGATCGCATCTCTGAGTCGGCTGGACATGGCGAAGAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTCTATGGATCGCCGGTTTTGCAACAAGGGACTGAAGGTGTTGGGAAAATGGGCACTGGATTGTCCACTGATGATGGAGTAATTGGTTCGGTTAGCTGCGAGGAGTGGCTGGAGAAGGAGGATGCTGTGAAGTATTCTAGGGACTTCAAAAGGGAACCTGTTTTGGTTTCTGGTTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAGTTTGGATTTAATCCTGGTCAGCAACCTGATGCTGTATTGGGATCACCTCAACAAGGTAGAGTTGCTAGCGTGCTTCGATCAATGGAATCGTCACATTACTATCCAGAGAATAATATTGCTATGGCGAGACGGAAGGGTTACACTGTGGTTATGACCACTAGTCTATCATCAGATGTTCCTGTTGGATATTTTTCGTGGGCAGAATATGAGATAATGGCACCAGTGCAGCCAAAGACCGAGCCCTCCCTTGCAGCTGCCTTCATTTCGAATTGTGGTGCCCGCAACTTCCGCTTGCAAGCTCTTGATGCGCTTGAGAAGTTGAATGTCAAAATTGATTCATATGGTAGTTGCCATAGGAACCGTGATGGAAGAGTTGACAAAGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAATGAGGAAGATTATGTCACCGAAAAGTTTTTCCAATCTCTTGTTGCAGGAACTATTCCCGTGGTGGTTGGCGCTCCAAATATTCAGGAGTTCGCTCCTTCTCCTGACTCATTTTTGCATATCAAGGAATTTTCCGATGTTGAGTCGATCGCCAAGACCATGAAACACCTTGCTGAAAATCCCAAATTGTACAATCAATCGCTGAGATGGAAGTATGATGGTCCATCTGATTCTTTCAAGGCCCTTGTAGATATGGCTGCAGTACACTCATCATGTCGCCTTTGCATCCACTTGGCAACCATTATCCATGAGAAAGAAGAAAACAGTCCCGGGTTCAAGAAACGACCGTGCAAGTGCTCTCGAGGCTCCGAAACCGTGTATCATTTATACGTAAGGGAGAGAGGGATGTTTGAAGTGCAATCCATTTTCTTGAGGTCAGGGAATTTGACATTGGAGGCTTTAGAGTCAGCTGTACTCGAAAAGTTCAAATCCTTGAAACACGTACCGATTTGGAAGCAAGAACGACCCGAAAGCATACGAGGAGGAGATGAACTGAAAATATACAGAATATATCCTGTTGGGTTGACTCAAAGGCAGGCTTTATATAGCTTCAGATTCAAAGCTAATTACAGATCATGCGCCATTGTTGTAAATGTTGAGAACAGAATTGGCCTTTGTGGGCGTAATGCATATCAGATAATGGCTAGTCGATTTTAG 1569 45.57 MGIFSKQKFWRTGATHDDSTGLNGAPAASKRKWTGFMPLFVAMVVIAEIASLSRLDMAKNAAMVDSWVDLFYGSPVLQQGTEGVGKMGTGLSTDDGVIGSVSCEEWLEKEDAVKYSRDFKREPVLVSGSEKEWRTCDVGCQFGFNPGQQPDAVLGSPQQGRVASVLRSMESSHYYPENNIAMARRKGYTVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTEPSLAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQEFAPSPDSFLHIKEFSDVESIAKTMKHLAENPKLYNQSLRWKYDGPSDSFKALVDMAAVHSSCRLCIHLATIIHEKEENSPGFKKRPCKCSRGSETVYHLYVRERGMFEVQSIFLRSGNLTLEALESAVLEKFKSLKHVPIWKQERPESIRGGDELKIYRIYPVGLTQRQALYSFRFKANYRSCAIVVNVENRIGLCGRNAYQIMASRF 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35106449 35112150 - Lag0001758.1 Lac4g1638 605170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1638 522 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 87 485 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Lac4g1638 522 Gene3D - 167 361 IPR038577 -
Lac4g1638 522 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 389 - -
Lac4g1638 522 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 170 362 - -
Lac4g1638 522 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 223 384 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2551 Lac-Chr5:44085010 Lac4g1638 Lac-Chr4:35106449 1.50E-145 transposed
Lac4g1638 Lac-Chr4:35106449 Lac5g2550 Lac-Chr5:44081204 3.70E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1638 K00753 - csv:101205170 909.827