Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1689 ATGAAGAAACGGAAACAAAAAACTAGAACATATGTGGGTGTCGGAGATTTTGAGGAAGTGCAATTGTTTTATTACTTTGTGAAATCCGAAGGAAATCCTCAGACAGATCCTCTGCTTTTTTGGCTCACCGGTGGCCCTGGTTGCTCTGCTTTGACTGCACTTGCCTATGAAGTTGGTCCTATAAATTTTAAGTTAGAGCGATACAATGGGAGCTTACCTCAAATAATCTTGAACCCTTATTCATGGACGAAGAAATCCAATATATTATTTGTAGATTTGCCGGTGGGCTCTGGATTTTCATATGGTAAAACTCCCCATTCTCTCGAGACAGGAGATTTTAGTCAAGTTCGCCATTCTATTCAATTTTTGCAAAAGTGGTTGCAAGTTGACCATCCAGAATTTATATCTAACCCTTTTTATGTGGGTGGAGATTCATACTGTGGTATGGTTGTTCCAGTTATTGCTCAAGAAATTTTACAAGAAAATAAGCATGCTTTACCATTTGTAAATCTTCAGGGATACATATTGGGAAATCCTATGACCAATCGTGATTCATGGAAAAATTTTCAAATTCCTTATGCTCATAGGATGAGTCTCATTTCTGATGAATTATTCGAGTCATTGACCACCAGTTGCAAGGGAGAATATGTGAATATTGATCCAACCAATGTGGATTGCTTAAGACATTATGATGCGTACCAAAAGTGTGTTTCAAATCTCGAGAAAGGACATATTTTGTTGCCAAAATGTTCCTTTCGTTCTCCAAAGCAACAAGAAGATGAATTTGATCGAAGATCTCTGTACAACAACACTCCCAAACTGTTCCTTGATCCGAAGCCACCACTTCTTTCTCTTGATTGTCCAGCGTATAAGTTTCAACTGTCTTTCCATTGGGCTAACAACAATCAAGTTCGAAAAGCACTTCATATACGTGAGGAAAGCATTGGAGAATGGACAAGATGTAAGATTCGAGGTCACTACAGCTATGATATTGAGAGTGCTTTTCCTTATCATGTGAACCTTAGTTTTAAAGGATACCGGTCTTTAATCTATAGTGGGGATCATGATATGGTTGTATCACATTTGGATACTCAAGCGTGGATTAGATCGTTAAATTATTCCATTGTTGATGACTGGAGACCTTGGTTTATCGTGGATCAAGTAGTCGGATATACAAGAACCTATGCAAATAAGATGACATTTGCAACTATTAAAGGTGGAGGTCACACAGCAGAATACACACAAAAAGAATGCAGTGTAGTGTTTAGTAGATGGATTAGTGGAGAATCCTTGTGA 1296 38.04 MKKRKQKTRTYVGVGDFEEVQLFYYFVKSEGNPQTDPLLFWLTGGPGCSALTALAYEVGPINFKLERYNGSLPQIILNPYSWTKKSNILFVDLPVGSGFSYGKTPHSLETGDFSQVRHSIQFLQKWLQVDHPEFISNPFYVGGDSYCGMVVPVIAQEILQENKHALPFVNLQGYILGNPMTNRDSWKNFQIPYAHRMSLISDELFESLTTSCKGEYVNIDPTNVDCLRHYDAYQKCVSNLEKGHILLPKCSFRSPKQQEDEFDRRSLYNNTPKLFLDPKPPLLSLDCPAYKFQLSFHWANNNQVRKALHIREESIGEWTRCKIRGHYSYDIESAFPYHVNLSFKGYRSLIYSGDHDMVVSHLDTQAWIRSLNYSIVDDWRPWFIVDQVVGYTRTYANKMTFATIKGGGHTAEYTQKECSVVFSRWISGESL 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35670136 35673550 + Lag0001809.1 Lac4g1689 605221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1689 431 Gene3D alpha/beta hydrolase 1 431 IPR029058 -
Lac4g1689 431 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 425 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Lac4g1689 431 SUPERFAMILY alpha/beta-Hydrolases 11 429 IPR029058 -
Lac4g1689 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 152 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac4g1689 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 91 101 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac4g1689 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 78 90 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac4g1689 431 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Lac4g1689 431 FunFam Carboxypeptidase 286 430 - -
Lac4g1689 431 FunFam Serine carboxypeptidase-like 11 6 431 - -
Lac4g1689 431 Pfam Serine carboxypeptidase 9 428 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0407 Lac-Chr2:2974242 Lac4g1689 Lac-Chr4:35670136 2.60E-184 dispersed
Lac2g0408 Lac-Chr2:2985560 Lac4g1689 Lac-Chr4:35670136 9.30E-227 dispersed
Lac2g0410 Lac-Chr2:3000455 Lac4g1689 Lac-Chr4:35670136 2.00E-104 dispersed
Lac2g0411 Lac-Chr2:3013391 Lac4g1689 Lac-Chr4:35670136 2.10E-149 dispersed
Lac4g1689 Lac-Chr4:35670136 Lac4g1847 Lac-Chr4:37725544 3.80E-89 dispersed
Lac4g1689 Lac-Chr4:35670136 Lac11g0477 Lac-Chr11:4962947 4.20E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1689 K16296 - csv:101207623 545.043