Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1732 ATGGGATCGTGCCTCTCTGGGGACCGCAACAATCGCGCGGTCACTTATTCTGAGCTCGCTTCCACTTCTCGTGATGATGGCCTTGTTACCGGAAGGAACTCCAAGAGGAAGATTGCGAGAAAGGGTTCTTCTCCCTCCAATGACTCTTCAAGGGAGATGTCGCTTCATCGAGTTCCTGGCCGGATGTTTTTGAATGGATCAACTGATCATGCGTCGCTCTTTACTAGGCAAGGCAAGAAAGGCATGAATCAGGATGCCATGATTGTCTGGGAGAATTTTGGTTCAAAAGAAGATACAATATTTTGCGGAGTCTTTGATGGACATGGTCCCTTTGGCCATATGGTTGCAAAGAAAGTTAGAGATTCTCTTCCTCTAAAACTTAAGTGGGAATTGGATCCTACCAGAAAGGAAGAGCAAAATGATGCGAGATGTCAAGTCTCTCCACCAATCCTGAAGAACAAGGACTCTGGAACCTCTCATTGTGATCTTGGTCGTCAGGGCAGTTACAATGACATTTATGTCATGTTGAAAGAGTCTTTTCTGAAGGCTTTTAAGGCGATGGACAAAGAGCTTAAAATACACCCATATATTGATTGCTATACCAGTGGTACGACATCAGTTGCTTTGGTTAAACAGGGTCAGGATCTTATCATCGGAAATGTTGGGGACTCGAGGGCTGTATTAGGTACCAGAGATAAATCTAACTCTCTCATTGCAGTTCAGTTGACTGTAGACCTCAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGACTTTGCAAAGGAAGAATATTTGCTCTTCAAAATGAACCTCAGATTTTTCGGGTTTGGCTTCCCAACACTGACTCTCCTGGGCTTGCTATGGCCAGAGCCTTCGGAGATTTCTGTTTAAAAGACTTTGGCTTGATAGCGGTTCCTGATGTTTCTTATTATCATCTTACTGAGAAAGATGAATTTGTGGTATTGGCTACGGATGGGGTTTGGGATGTTCTCTCAAATGAAGAGGTGGTGGGAATTGTAGCTTCTTCTCCCAGACCATCCGCAGCTCGTAGCCTTGTGGACTCGGCTACTCGAGCATGGAGATTTAAGTACCCTACGGCCAAGGTGGATGATTGTGCTGTAGTCTGCCTGTACCTGGACTCTAATGAGAGTGCTGCAGTTACAGCTAAAGAGCAGGAGTTCACCAATGACATGGAAACTTAG 1203 45.14 MGSCLSGDRNNRAVTYSELASTSRDDGLVTGRNSKRKIARKGSSPSNDSSREMSLHRVPGRMFLNGSTDHASLFTRQGKKGMNQDAMIVWENFGSKEDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLKWELDPTRKEEQNDARCQVSPPILKNKDSGTSHCDLGRQGSYNDIYVMLKESFLKAFKAMDKELKIHPYIDCYTSGTTSVALVKQGQDLIIGNVGDSRAVLGTRDKSNSLIAVQLTVDLKPNLPREAERIRLCKGRIFALQNEPQIFRVWLPNTDSPGLAMARAFGDFCLKDFGLIAVPDVSYYHLTEKDEFVVLATDGVWDVLSNEEVVGIVASSPRPSAARSLVDSATRAWRFKYPTAKVDDCAVVCLYLDSNESAAVTAKEQEFTNDMET 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36221281 36225450 + Lag0001852.1 Lac4g1732 605264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1732 400 MobiDBLite consensus disorder prediction 24 53 - -
Lac4g1732 400 ProSiteProfiles PPM-type phosphatase domain profile. 70 379 IPR001932 -
Lac4g1732 400 PANTHER PROTEIN PHOSPHATASE 52 377 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac4g1732 400 Pfam Protein phosphatase 2C 78 354 IPR001932 -
Lac4g1732 400 SMART PP2C_4 59 377 IPR001932 -
Lac4g1732 400 CDD PP2Cc 70 379 IPR001932 -
Lac4g1732 400 SUPERFAMILY PP2C-like 70 380 IPR036457 -
Lac4g1732 400 Gene3D - 65 381 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1663 Lac-Chr3:16338429 Lac4g1732 Lac-Chr4:36221281 7.60E-130 dispersed
Lac4g1732 Lac-Chr4:36221281 Lac5g0625 Lac-Chr5:7426645 1.20E-118 dispersed
Lac4g1732 Lac-Chr4:36221281 Lac6g1670 Lac-Chr6:24678812 2.00E-132 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1732 - - - 0.0