Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1740 ATGCAAGAAGTTCAAGCTCTTAATAAAAGGACCTGTAGTAGTCTGGTGAAGGCTTATGCCCCTGCTCCTGGTCACGTATTACATCCAGAGAACATAAGTACTGAGGATAATCAATATCGAAGGAAGAAAGTGAGAATGCGCAGGTTGTTTTGTTGTTTTTGTCAAGTTGAAGAGACTAATCAGTCAACTGAAAATGAGCACCTGAAAAGCCCCAGTAATTTTGGAGATGGTCAACCAAAGGGCTCTAAAGTGTCAGATCCTGTTAAACCCGAGGCACAAAAAGCAGCACCAACAATTGAAGTGCCTGCACTCTCCCTGGATGAACTGAAAGAAAAGACTGATAATTTTGGTTCCAAAGCATTGATTGGAGAAGGTTCTTATGGTAGAGTTTACTATGCAAGCTTGAATAATGGGAAAAACGTGGCTGTAAAAAAGCTCGATGTTTCATCTGAGCCTGACAGTAACATTGAGTTTTTGACTCAGGTTTCTACAGTATCAAGATTGAAACATGAAAATCTTGTCGAATTGCTTGGGTATTGTGTTGAAGGAAATCTTCGTGTATTGGCATATGAATATGCAACCATGGGATCTTTGCATGATGTATTACATGGAAGGAAGGGAGTACAAGGAGCACAACCTGGTCCAGTGCTCGACTGGATGCAGCGAGTGAGAATTGCAGTTGATGCAGCCAAAGGGCTGGAATATTTGCATGAAAAGGTCCAACCTGCTATTATACACCGAGACATCAGGTCCAGCAACGTGCTTCTCTTTGAGGATTTTAAAGCTAAGGTAGCTGATTTTAACCTCTCCAATCAAGCCCCTGATATGGCAGCCCGTCTTCATTCAACTCGAGTTTTGGGAACTTTTGGTTACCATGCTCCAGAATACGCAATGACAGGACAGTTGACTCAGAAGAGCGATGTATACAGCTTTGGTGTAGTTCTACTTGAGCTATTGACCGGTAGGAAACCTGTCGATCACACGATGCCCCGCGGGCAGCAAAGTCTAGTGACCTGGGCTACTCCAAGACTAAGTGAGGACAAAGTGAAGCAATGTGTAGATCCAAGATTAAAGGGAGAATACCCTCCCAAAGGAGTTGCAAAGCTAGCAGCTGTGGCAGCATTGTGCGTGCAGTATGAAGCCGAGTTCCGACCAAACATGAGCATCGTCGTGAAAGCCCTCCAACCTCTTCTAAAGCCCCCCGCACCTACCGGTCCACCTGCACCGGAGTCTTGA 1236 44.82 MQEVQALNKRTCSSLVKAYAPAPGHVLHPENISTEDNQYRRKKVRMRRLFCCFCQVEETNQSTENEHLKSPSNFGDGQPKGSKVSDPVKPEAQKAAPTIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYASLNNGKNVAVKKLDVSSEPDSNIEFLTQVSTVSRLKHENLVELLGYCVEGNLRVLAYEYATMGSLHDVLHGRKGVQGAQPGPVLDWMQRVRIAVDAAKGLEYLHEKVQPAIIHRDIRSSNVLLFEDFKAKVADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPRLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKPPAPTGPPAPES 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36283991 36289467 - Lag0001860.1 Lac4g1740 605272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1740 411 Pfam Protein tyrosine and serine/threonine kinase 121 394 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac4g1740 411 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524(InterPro)
Lac4g1740 411 CDD STKc_IRAK 122 397 - -
Lac4g1740 411 ProSiteProfiles Protein kinase domain profile. 116 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac4g1740 411 SUPERFAMILY Protein kinase-like (PK-like) 96 394 IPR011009 -
Lac4g1740 411 ProSitePatterns Tyrosine protein kinases specific active-site signature. 244 256 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac4g1740 411 MobiDBLite consensus disorder prediction 62 79 - -
Lac4g1740 411 Gene3D Transferase(Phosphotransferase) domain 1 194 401 - -
Lac4g1740 411 MobiDBLite consensus disorder prediction 62 96 - -
Lac4g1740 411 SMART tyrkin_6 116 394 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Lac4g1740 411 FunFam PTI1-like tyrosine-protein kinase 3 194 403 - -
Lac4g1740 411 Gene3D Phosphorylase Kinase; domain 1 87 192 - -
Lac4g1740 411 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 51 401 IPR052101 -
Lac4g1740 411 FunFam PTI1-like tyrosine-protein kinase 3 79 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g2665 Lac-Chr10:40804942 Lac4g1740 Lac-Chr4:36283991 6.10E-143 dispersed
Lac4g1740 Lac-Chr4:36283991 Lac7g1172 Lac-Chr7:10801545 3.30E-191 dispersed
Lac4g1740 Lac-Chr4:36283991 Lac12g0765 Lac-Chr12:8015924 2.00E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86131 PF07714 PK_Tyr_Ser-Thr 3.20E-47 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1740 K13436 - csv:101221382 637.876