Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g1791 ATGAGGTTTAGCATTGTGGAAGGTGAAAATACATTACAACCACCAGTGAAGCTGATATGGCATTACTACAAACTCAACACAAGTTGCCCTAATGCTGAGACATTCATAAAGCATCAAGTCAACTTGTTTTGGCAAAATGATAAAACCATCACTGCCAAGTTCCTTCGCTTGCTCTCTGCTGATTGCCTTTCCAAAAATGGTTGTGATGGTTCAATACTTCTTGATGGTCCAAACTCAGAGAAAAATGCACCACAAAACAAAGACCTTGGAGGGTTTGAAGAAATTGACAAGATCAAAATTGTACTCGAAGACCGATGCCCGGGCGTTGTTTCGTGCGCAGACATTCTCAACTTAGCCACTAGAGACGCTGCCCGTTTGGCAGGTGCGCCGTCTTATCCGGTTTTTACAGGGAGGAGGGATGGTTTGACGACAAGTGTTGATGAAGTGGATTTTCCATCCCCCTCCATATCATGGCAAGAAGGGCTTGCATATTTCCAGTCTAAAGGTCTTGATGTTTTGGACATGGCAACATTGCTAGGTGCACATTCAATGGGAAAAACACACTGTCGCTACATCAAGGACAGGCTATACAATTTCAATGGCACAGGAAAACCAGATCCAACAATGAACAAATCCTTCTTAAAAGAGCTTCAAAAGAAATGCCCCAAAAATTCAAAAACAGACCCAACTGTGAATCTAACACCAAAATCTGGCAATGACTATCAATTCACAGGTCTCTACTACTCCAGAATCCTTTCCAAGAAGGCCGTCCTCGGAATCGATCAACAGCTTCTTTTCGGTAACGACACCAACGAAATCGTCCAAGAGTTTGCTCCTAAATCTGGATTCGAGGACTTCCGTAGGTCCTTTGCTCTCTCCATGAGTAGGATGGGAAGTATCAAGGTCTTGACCGGAAAAGATGGCGAGATTCGCCGAAATTGTCGACGGAGAAACTAG 957 43.78 MRFSIVEGENTLQPPVKLIWHYYKLNTSCPNAETFIKHQVNLFWQNDKTITAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNKDLGGFEEIDKIKIVLEDRCPGVVSCADILNLATRDAARLAGAPSYPVFTGRRDGLTTSVDEVDFPSPSISWQEGLAYFQSKGLDVLDMATLLGAHSMGKTHCRYIKDRLYNFNGTGKPDPTMNKSFLKELQKKCPKNSKTDPTVNLTPKSGNDYQFTGLYYSRILSKKAVLGIDQQLLFGNDTNEIVQEFAPKSGFEDFRRSFALSMSRMGSIKVLTGKDGEIRRNCRRRN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36907233 36909965 + Lag0001911.1 Lac4g1791 605323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g1791 318 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 FunFam Peroxidase 152 297 - -
Lac4g1791 318 PANTHER PEROXIDASE 25-RELATED 22 314 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Lac4g1791 318 SUPERFAMILY Heme-dependent peroxidases 24 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 CDD secretory_peroxidase 17 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac4g1791 318 Gene3D - 22 318 - -
Lac4g1791 318 ProSiteProfiles Plant heme peroxidase family profile. 17 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 Pfam Peroxidase 38 278 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac4g1791 318 Gene3D Peroxidase, domain 2 152 297 - -
Lac4g1791 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 174 184 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g1791 Lac-Chr4:36907233 Lac1g2545 Lac-Chr1:46818589 6.50E-54 dispersed
Lac4g1791 Lac-Chr4:36907233 Lac10g1775 Lac-Chr10:21559474 7.40E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g1791 K00430 - csv:101213667 558.525