Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac4g2084 | ATGAACTGGGCTTCCATGGAAACAGCCATTACCACCCACTTTCAACTCTTAATTCCTTTCTTCCTTTTCATTTTCACAATCTTTCTGTTGCAGAGAAGGAAACCCACAACCAAAAATCTTCCTCCCAGCCCTCTCGCCCTCCCCGTCATCGGCCATCTCCATCTCCTCAAGCACCCCATCCACAGAACTCTACAGACTCTCTCACAAAAGCACGGCCCCATTTTCACCCTCCGCCTCGGCTCCCGTCTCGTCGTCGTCGTCTCCTCCACCTCCGCCGTCGAAGAATGCTTCACCACCAACGACATCGTCTTCGCCAACCGCCCGGAGTTCGTTTCCGGCAAGTACCTCACCTACGGCAACAGCACCCTCGGAGCCGCCCCCTACGGCGACCACTGGCGCAACCTTAGGCGGCTGAGCGCCACGGAGGTCCTCTCGTCGATCCGACTGAACTCGTCGGCGGGGATCCGGAGGGAGGAAATCGGTATTCTACTGCGGAAGCTGCATCGAGTTTCGGGGGACGATTTCGGAAGGGTGAAGTTGAAATCGCTGTTTTCGGAGTTGACGTTCAATATAATAATGAGAATGGTGGCCGGAAAACGGTACTACGGCGAGGAAGTGGCGGAGTTGGAAGAGGCGAAGAAGTTCAGAGAAATCATGGAGAAGGCGTTTCAATTGGGGTCGTATCCAGGGGATTTCTTGCCGTTTCTGAAGTGGGTGGATCGTCAGTACACGAAACGGGTGGAAAGTCTGGGGAGAGACACGGATGGGTTCTTGCAGAATTTGGTGGATGAACATCGGAGAGACGAAGGGGAAGGGAAAAAGATGAATACGATGATCAGTCATCTGCTCTGTTTGCAGAAGACTCAGCCTGATTATTACACAGATGAAATCATCAAAGGCCTTATCGTTACAATTTTATCAGCAGCAACAGAAACATCCTCGGTGACAATAGAGTGGGCAATGTCGAATCTACTCAACCATCCCGAAGCACTAAACAAAGTAAAGGACGAACTGGACAAACACATCGGCCAAGAGCGGTTCGTGGAAGAAGACGACATTCCCAATCTACAATACTTACAGAACGTGATTTCGGAGACACTTCGCCTATATCCAGCAGCTCCACTCCTAGCTCCACATCTCTCCTCGGACAGTTGTTCTCTCGGAGGCTACCACATTCCTCCAGACACCATCTTGATGGTCAACGCCTGGGCCGTCCAAAGGGACCCCAAAGTTTGGGATGACTCGACCAGCTTCAAACCAGAGAGGTTCCAAAATGGCGGATCGGCACCCAACAACGCCTACAAGTTCTTGCCCTTTGGACTGGGCAGAAGGGCTTGCCCTGGGATGGGCATGGCCAACCGTGTGGTGGGCTTGACTTTGGGGTCGTTGATTCAGAGTTTTGAGTGGAAGAGGCTCGGCGGAAAGGAGATTGACATGACTGAAGGCCAAGGAATCTCCATGCCTAAAGTTGAGCCCTTGGAGGCCTTGTGTAAAGCTCGCCCCATCATGAAAAAGCTTGCGTCTGATACCATTAATTAG | 1539 | 52.05 | MNWASMETAITTHFQLLIPFFLFIFTIFLLQRRKPTTKNLPPSPLALPVIGHLHLLKHPIHRTLQTLSQKHGPIFTLRLGSRLVVVVSSTSAVEECFTTNDIVFANRPEFVSGKYLTYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNSSAGIRREEIGILLRKLHRVSGDDFGRVKLKSLFSELTFNIIMRMVAGKRYYGEEVAELEEAKKFREIMEKAFQLGSYPGDFLPFLKWVDRQYTKRVESLGRDTDGFLQNLVDEHRRDEGEGKKMNTMISHLLCLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPEALNKVKDELDKHIGQERFVEEDDIPNLQYLQNVISETLRLYPAAPLLAPHLSSDSCSLGGYHIPPDTILMVNAWAVQRDPKVWDDSTSFKPERFQNGGSAPNNAYKFLPFGLGRRACPGMGMANRVVGLTLGSLIQSFEWKRLGGKEIDMTEGQGISMPKVEPLEALCKARPIMKKLASDTIN | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 40534507 | 40537449 | - | Lag0002204.1 | Lac4g2084 | 605616 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac4g2084 | 512 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Lac4g2084 | 512 | Gene3D | Cytochrome P450 | 26 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | Pfam | Cytochrome P450 | 41 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | FunFam | Cytochrome P450 family protein | 31 | 503 | - | - | |
Lac4g2084 | 512 | PANTHER | CYTOCHROME P450 82C3-RELATED | 22 | 500 | IPR050651 | - | |
Lac4g2084 | 512 | SUPERFAMILY | Cytochrome P450 | 41 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 401 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 92 | 113 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 187 | 205 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lac4g2084 | 512 | CDD | CYP81 | 72 | 493 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac13g2324 | Lac-Chr13:36850104 | Lac4g2084 | Lac-Chr4:40534507 | 2.50E-28 | dispersed | |
Lac2g0365 | Lac-Chr2:2742169 | Lac4g2084 | Lac-Chr4:40534507 | 1.80E-143 | dispersed | |
Lac2g0888 | Lac-Chr2:6995338 | Lac4g2084 | Lac-Chr4:40534507 | 7.20E-132 | dispersed | |
Lac4g0020 | Lac-Chr4:399057 | Lac4g2084 | Lac-Chr4:40534507 | 4.90E-61 | dispersed | |
Lac4g2082 | Lac-Chr4:40524930 | Lac4g2084 | Lac-Chr4:40534507 | 3.20E-164 | dispersed | |
Lac4g2084 | Lac-Chr4:40534507 | Lac9g1247 | Lac-Chr9:28876482 | 1.00E-149 | dispersed | |
Lac4g2083 | Lac-Chr4:40530483 | Lac4g2084 | Lac-Chr4:40534507 | 3.90E-48 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac4g2084 | K13260 | - | csv:101207828 | 821.617 |