Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2091 ATGCTTTTACATCTTTCTTCTCCAACCTTTATTCTGAAAACAGTGGCTCTAGATTTCTTCCCAGTCTTCTTAGCTTGGTCTTCAAAGTTCAACAGCCATGAAATGAAGGATAGCCTTTTAAGGTCCTCTTTACCAAAGGAGGAATCCTTGCAGCCAGGAATAAAAGCCTTGTATCTGATGGCATCACCTCTGAATTCTGTGAAAATTGTTGATCTCTCTCTCTCGTCTCTCCCGAGCAGAGTCTGCGGCCCCCCCTCCCCAAGTTCCGAACTGCCATCTTCAATCTCTCTCAGATCTTCTCCGGCGGACCGAGATCTCTCTCGCGAACGTCTTACCGGTGGTATCTCTCACGAGCGCTATTCCCCATCCTATCGGCCGGCGGCAGCTCTCTCTCACGAACACCCATCGCGGCGGCATCTTTCTCTCTCGAGCATCCATCCCGCCGTATTCTTATTTATTACGATGGCTGATGCTCATGAAACTGATAAGAACATTGAAATATGGAAAATTAAGAAGTTGATTAAAGCACTTGAAGCTGCAAGAGGTAATGGGACTAGCATGATCTCTCTCATCATGCCTCCGCGTGATCAAATATCTCGTGTTACTAAGATGCTTGGTGATGAATTTGGAACGGCTTCAAACATTAAGAGCAGGGTGAATCGCCAATCTGTTTTGGGCGCTATCACATCTGCACAGCAGAGACTCAAGCTGTATAACAGGGTTCCTCCAAATGGGCTTGTGTTATATACTGGGACAATCGTGACTGAAGATGGTAAAGAAAAGAAAGTCACAATTGATTTTGAGCCTTTCAGACCTATAAATGCATCTCTCTATCTCTGCGACAACAAGTTCCATACGGAAGCCCTGAATGAACTTTTAGAATCTGATGACAAGTTTGGCTTCATTGTCATGGATGGTAATGGAACACTCTTTGGCACATTGAGTGGTAACACACGTGAGGTCCTTCACAAGTTTAGTGTCGACCTTCCTAAGAAACACGGAAGAGGAGGTCAGTCAGCACTTAGGTTTGCTCGTCTTCGAATGGAGAAGCGGCATAACTATGTGAGGAAAACAGCAGAGCTTGCAACCCAGTTCTTTATTAATCCTGCCACTAGTCAACCCAATGTTGCAGGATTGATACTGGCCGGATCAGCTGACTTCAAAACAGAGCTCAGTCAATCAGACATGTTTGATCCTCGTCTTCAAGCCAAAATACTTAATGTGGTTGATGTCTCTTATGGAGGTGAAAATGGGTTCAATCAGGCTATTGAATTGTCATCCGAGATCTTGTCTAATGTAAAATTTATACAGGAGAAGCGCCTAATTGGAAAATACTTTGAAGAGATTAGTCAGGACACAGGGAAATATGTTTTTGGTGTTGACGACACACTGAAAGCTCTGGAGATGGGTGCTGTTGAGATTCTCATTGTTTGGGAAAATTTGGATATCAATAGGTACGTACTAAAGAATGCTGCCACTGGTGAGATTGTTATAAAGCACTTGAATAAGGAACAGGAAGCCAATCAGAGTAACTTCCGTGACCCCGTCAGTGCTGCTGAGTTGGAGGTTCAAGAAAAGATGGCCTTGCTGGAATGGTTTGCAAACGAGTACAAGCAGTTTGGTTGCACCCTGGAGTTCGTTACCAATAAATCACAGGAAGGATCACAGTTCTGCAGAGGTTTTGGTGGTATTGGAGGAATTCTCCGTTACCAGCTTGACATGAGGTCGTTTGATGAACTATCTGATGGGGAAGAGTACGGTGATTCTGAATAG 1773 44.33 MLLHLSSPTFILKTVALDFFPVFLAWSSKFNSHEMKDSLLRSSLPKEESLQPGIKALYLMASPLNSVKIVDLSLSSLPSRVCGPPSPSSELPSSISLRSSPADRDLSRERLTGGISHERYSPSYRPAAALSHEHPSRRHLSLSSIHPAVFLFITMADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNAATGEIVIKHLNKEQEANQSNFRDPVSAAELEVQEKMALLEWFANEYKQFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDELSDGEEYGDSE 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40601724 40605865 - Lag0002211.1 Lac4g2091 605623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2091 590 Gene3D - 433 590 IPR029064 -
Lac4g2091 590 MobiDBLite consensus disorder prediction 80 112 - -
Lac4g2091 590 Pfam eRF1 domain 1 171 293 IPR005140 -
Lac4g2091 590 SUPERFAMILY L30e-like 432 574 IPR029064 -
Lac4g2091 590 FunFam Eukaryotic peptide chain release factor subunit 1 290 431 - -
Lac4g2091 590 NCBIfam peptide chain release factor aRF-1 166 571 IPR004403 GO:0003747(InterPro)|GO:0006415(InterPro)
Lac4g2091 590 SUPERFAMILY Translational machinery components 296 430 - -
Lac4g2091 590 Pfam eRF1 domain 2 298 431 IPR005141 -
Lac4g2091 590 FunFam Peptide chain release factor subunit 1 433 590 - -
Lac4g2091 590 Gene3D eRF1 domain 2 290 431 IPR042226 -
Lac4g2091 590 Gene3D eRF1 domain 1 152 289 IPR024049 -
Lac4g2091 590 MobiDBLite consensus disorder prediction 80 101 - -
Lac4g2091 590 FunFam Eukaryotic peptide chain release factor subunit 1 156 289 - -
Lac4g2091 590 SMART eRF1_1_2 158 294 IPR005140 -
Lac4g2091 590 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 156 581 IPR004403 GO:0002184(PANTHER)|GO:0003747(InterPro)|GO:0005829(PANTHER)|GO:0006415(InterPro)|GO:0016149(PANTHER)|GO:0018444(PANTHER)|GO:1990825(PANTHER)
Lac4g2091 590 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 160 294 IPR024049 -
Lac4g2091 590 Pfam eRF1 domain 3 435 572 IPR005142 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2091 K03265 - csv:101203556 834.328