Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac4g2091 | ATGCTTTTACATCTTTCTTCTCCAACCTTTATTCTGAAAACAGTGGCTCTAGATTTCTTCCCAGTCTTCTTAGCTTGGTCTTCAAAGTTCAACAGCCATGAAATGAAGGATAGCCTTTTAAGGTCCTCTTTACCAAAGGAGGAATCCTTGCAGCCAGGAATAAAAGCCTTGTATCTGATGGCATCACCTCTGAATTCTGTGAAAATTGTTGATCTCTCTCTCTCGTCTCTCCCGAGCAGAGTCTGCGGCCCCCCCTCCCCAAGTTCCGAACTGCCATCTTCAATCTCTCTCAGATCTTCTCCGGCGGACCGAGATCTCTCTCGCGAACGTCTTACCGGTGGTATCTCTCACGAGCGCTATTCCCCATCCTATCGGCCGGCGGCAGCTCTCTCTCACGAACACCCATCGCGGCGGCATCTTTCTCTCTCGAGCATCCATCCCGCCGTATTCTTATTTATTACGATGGCTGATGCTCATGAAACTGATAAGAACATTGAAATATGGAAAATTAAGAAGTTGATTAAAGCACTTGAAGCTGCAAGAGGTAATGGGACTAGCATGATCTCTCTCATCATGCCTCCGCGTGATCAAATATCTCGTGTTACTAAGATGCTTGGTGATGAATTTGGAACGGCTTCAAACATTAAGAGCAGGGTGAATCGCCAATCTGTTTTGGGCGCTATCACATCTGCACAGCAGAGACTCAAGCTGTATAACAGGGTTCCTCCAAATGGGCTTGTGTTATATACTGGGACAATCGTGACTGAAGATGGTAAAGAAAAGAAAGTCACAATTGATTTTGAGCCTTTCAGACCTATAAATGCATCTCTCTATCTCTGCGACAACAAGTTCCATACGGAAGCCCTGAATGAACTTTTAGAATCTGATGACAAGTTTGGCTTCATTGTCATGGATGGTAATGGAACACTCTTTGGCACATTGAGTGGTAACACACGTGAGGTCCTTCACAAGTTTAGTGTCGACCTTCCTAAGAAACACGGAAGAGGAGGTCAGTCAGCACTTAGGTTTGCTCGTCTTCGAATGGAGAAGCGGCATAACTATGTGAGGAAAACAGCAGAGCTTGCAACCCAGTTCTTTATTAATCCTGCCACTAGTCAACCCAATGTTGCAGGATTGATACTGGCCGGATCAGCTGACTTCAAAACAGAGCTCAGTCAATCAGACATGTTTGATCCTCGTCTTCAAGCCAAAATACTTAATGTGGTTGATGTCTCTTATGGAGGTGAAAATGGGTTCAATCAGGCTATTGAATTGTCATCCGAGATCTTGTCTAATGTAAAATTTATACAGGAGAAGCGCCTAATTGGAAAATACTTTGAAGAGATTAGTCAGGACACAGGGAAATATGTTTTTGGTGTTGACGACACACTGAAAGCTCTGGAGATGGGTGCTGTTGAGATTCTCATTGTTTGGGAAAATTTGGATATCAATAGGTACGTACTAAAGAATGCTGCCACTGGTGAGATTGTTATAAAGCACTTGAATAAGGAACAGGAAGCCAATCAGAGTAACTTCCGTGACCCCGTCAGTGCTGCTGAGTTGGAGGTTCAAGAAAAGATGGCCTTGCTGGAATGGTTTGCAAACGAGTACAAGCAGTTTGGTTGCACCCTGGAGTTCGTTACCAATAAATCACAGGAAGGATCACAGTTCTGCAGAGGTTTTGGTGGTATTGGAGGAATTCTCCGTTACCAGCTTGACATGAGGTCGTTTGATGAACTATCTGATGGGGAAGAGTACGGTGATTCTGAATAG | 1773 | 44.33 | MLLHLSSPTFILKTVALDFFPVFLAWSSKFNSHEMKDSLLRSSLPKEESLQPGIKALYLMASPLNSVKIVDLSLSSLPSRVCGPPSPSSELPSSISLRSSPADRDLSRERLTGGISHERYSPSYRPAAALSHEHPSRRHLSLSSIHPAVFLFITMADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNAATGEIVIKHLNKEQEANQSNFRDPVSAAELEVQEKMALLEWFANEYKQFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDELSDGEEYGDSE | 590 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 40601724 | 40605865 | - | Lag0002211.1 | Lac4g2091 | 605623 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac4g2091 | 590 | Gene3D | - | 433 | 590 | IPR029064 | - | |
Lac4g2091 | 590 | MobiDBLite | consensus disorder prediction | 80 | 112 | - | - | |
Lac4g2091 | 590 | Pfam | eRF1 domain 1 | 171 | 293 | IPR005140 | - | |
Lac4g2091 | 590 | SUPERFAMILY | L30e-like | 432 | 574 | IPR029064 | - | |
Lac4g2091 | 590 | FunFam | Eukaryotic peptide chain release factor subunit 1 | 290 | 431 | - | - | |
Lac4g2091 | 590 | NCBIfam | peptide chain release factor aRF-1 | 166 | 571 | IPR004403 | GO:0003747(InterPro)|GO:0006415(InterPro) | |
Lac4g2091 | 590 | SUPERFAMILY | Translational machinery components | 296 | 430 | - | - | |
Lac4g2091 | 590 | Pfam | eRF1 domain 2 | 298 | 431 | IPR005141 | - | |
Lac4g2091 | 590 | FunFam | Peptide chain release factor subunit 1 | 433 | 590 | - | - | |
Lac4g2091 | 590 | Gene3D | eRF1 domain 2 | 290 | 431 | IPR042226 | - | |
Lac4g2091 | 590 | Gene3D | eRF1 domain 1 | 152 | 289 | IPR024049 | - | |
Lac4g2091 | 590 | MobiDBLite | consensus disorder prediction | 80 | 101 | - | - | |
Lac4g2091 | 590 | FunFam | Eukaryotic peptide chain release factor subunit 1 | 156 | 289 | - | - | |
Lac4g2091 | 590 | SMART | eRF1_1_2 | 158 | 294 | IPR005140 | - | |
Lac4g2091 | 590 | PANTHER | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 | 156 | 581 | IPR004403 | GO:0002184(PANTHER)|GO:0003747(InterPro)|GO:0005829(PANTHER)|GO:0006415(InterPro)|GO:0016149(PANTHER)|GO:0018444(PANTHER)|GO:1990825(PANTHER) | |
Lac4g2091 | 590 | SUPERFAMILY | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 160 | 294 | IPR024049 | - | |
Lac4g2091 | 590 | Pfam | eRF1 domain 3 | 435 | 572 | IPR005142 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac4g2091 | K03265 | - | csv:101203556 | 834.328 |