Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2157 ATGGAACCCTATCGTTCTCAGAAGAAATCTTCCACCACAACCAGTTCCCCTACCACTCTTCCCCTCTACCGCTCTGCTCCTCCTCTCGAAGTCAGGCTTGAAGAATTCGAGCTTTATGCCATAGATCGTCTTCGAGTCCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTGGAAAACCAATATGAAACATCCACAGGCATCCGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTTGTATACTGCAGAACCCATGAGTCAATGTACATTATTTCTTCTGCATTTGCAGAAGTTGGTATTTCGGAGCTTGGCCTCTCGTACAAAGCAATCAGTAATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGTACCAACTGCTGATGCAATATACTACAAGGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTCTCCATAAAGGATATGCGTACATTGCTATTTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCAAAGGCTCTGAGTCTGACAAACAGGAAATGGACATCTACAGTTAGAGAACAAGAGAAAGATCGGTTGACCCCTATCGTAGAAGCCCTTTGCACAAGCTACTTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCTGATATATCAATAAAGGACATTGACCAAGTAGCTAAAAGTTCATTTCCTCTTTGCATGCGGCACCTTTTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTTGCCTTCTGGAAAGCTGAGTTCTCCCATAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGACATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCACCTTATTCCTGTCAAAAAGTCATCTCATCATCGCCTGGTGTTGGAGATCATCATGGATGTCCCTATAGACATTTCAGCGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAATCGGACAATGGAAGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGTCGTGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAAGTCCTGCAATCCAAGTTGATAGTATTATTGGTGTCGCACATATCACAGTTTTTTACTGCAGATTCAAGACAATTCAACAGCCTAGTAAAATATGTACAGGCACCTCAAGAAGTGGGAATCTACTTTGGATTCTCCAGCAGCTTGGTGCAGCTTTTGCAGCCGGGTGGGAGTGGTTGTTATCGCTTTGGTTAG 1473 42.5 MEPYRSQKKSSTTTSSPTTLPLYRSAPPLEVRLEEFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELWKTNMKHPQASEVVNKDIISHFVLRLVYCRTHESMYIISSAFAEVGISELGLSYKAISNAEFEAVKDKLVQVARLIGQPVPTADAIYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTVREQEKDRLTPIVEALCTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSHRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKVISSSPGVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFESIHGSSCDAGINHPNQYFIDSQKVLQSKLIVLLVSHISQFFTADSRQFNSLVKYVQAPQEVGIYFGFSSSLVQLLQPGGSGCYRFG 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 41205907 41228784 + Lag0002277.1 Lac4g2157 605689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2157 490 MobiDBLite consensus disorder prediction 1 21 - -
Lac4g2157 490 CDD PriL_PriS_Eukaryotic 23 425 IPR016558 -
Lac4g2157 490 PIRSF DNA_primase_large 106 433 IPR016558 -
Lac4g2157 490 PIRSF DNA_primase_large 2 111 IPR016558 -
Lac4g2157 490 Pfam Eukaryotic and archaeal DNA primase, large subunit 157 422 IPR007238 GO:0006269(InterPro)
Lac4g2157 490 Gene3D - 2 108 - -
Lac4g2157 490 Gene3D - 109 230 - -
Lac4g2157 490 PANTHER DNA PRIMASE LARGE SUBUNIT 15 432 IPR007238 GO:0005658(PANTHER)|GO:0006269(PANTHER)|GO:0006269(InterPro)|GO:0006270(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g2287 Lac-Chr13:36228602 Lac4g2157 Lac-Chr4:41205907 3.50E-109 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2157 K02685 - csv:101217274 780.015