Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2233 ATGAGACTGAATTTAGCCAAATTTGCCTTTGGAGGCACCTCTCGGATAAGTTTCTCAACTTTATGGTCCACCAGCGAGAGCAAGGAAACTCCCTTAGCAGCGGTCACAATTAACTTTATAGCAGCAGTATCAGCTGGAGAAGTTCCCTTAACAGCGGTCCAATTATTATGGGTGAATCTCATAATGGATACATTGGCTGCTCTTGCTCTTGCTACTGAGAGACCAAATGATGAATTGATGCGCAAGCCTCCAACAGAGCCCCTAATAACAAATGTCATGTGGAGGAACCTTTTAGCTCAAGCATTATACCAAATAACAGTACTCTTGATTTTCCAGTTCCAAGGAAGCAACATCTTCAAAGTTAGTGAGAGGGTAAATGATACTCTAATCTTCAACACTTTTGTTCTCTGCCAAATCTTTAATGAGTTCAACTCGAGGAAACTAGTTAAACAGAATGTCTTTGAAGGCATTCTAAAGGATCATTTATTTCTTGGAATTGTGGGGGTAACATTTGTTCTACAAGTTGTTATGGTTGAATTCCTAAACAAGTTTGCAGATACAACGAATCTAAATGGTTGGCAATGGGGACTTTGCATTGCTATTCCAGCTTTGTCTTGGCCAATTGGTTGGATTGTCAACTTCTTGCCTGTTTCTGATAGGCCTTTCTGA 669 40.21 MRLNLAKFAFGGTSRISFSTLWSTSESKETPLAAVTINFIAAVSAGEVPLTAVQLLWVNLIMDTLAALALATERPNDELMRKPPTEPLITNVMWRNLLAQALYQITVLLIFQFQGSNIFKVSERVNDTLIFNTFVLCQIFNEFNSRKLVKQNVFEGILKDHLFLGIVGVTFVLQVVMVEFLNKFADTTNLNGWQWGLCIAIPALSWPIGWIVNFLPVSDRPF 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 41985824 41987273 + Lag0002353.1 Lac4g2233 605765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2233 222 PANTHER CATION TRANSPORTING ATPASE 32 218 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Lac4g2233 222 SUPERFAMILY Calcium ATPase, transmembrane domain M 33 217 IPR023298 -
Lac4g2233 222 Gene3D - 29 218 - -
Lac4g2233 222 Pfam Cation transporting ATPase, C-terminus 48 214 IPR006068 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2233 Lac-Chr4:41985824 Lac4g3082 Lac-Chr4:48935985 6.70E-58 dispersed
Lac4g2232 Lac-Chr4:41978222 Lac4g2233 Lac-Chr4:41985824 2.70E-74 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2233 K01537 - csv:101220140 343.584