Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2345 ATGGCAGGGAGTAATGAAGTCAACCTTAATGAATCTAAGAGGGTTGTTCCACTGAATACATGGGTGCTCATCTCCAATTTCAAGCTAGCTTACACCATCCTCCGCCGCTCAGACGGTACCTTCAACCGTGAGTTGGCGGAGTACCTTGAGCGTAAAGTTCCAGCCAATGTGTTTCCGGTTGATGGGGTGTTCTCGTTTGATCATGTCGATCGAGCTTCTGGCCTTCTCAACCGAGTTTACCAGCTGGCCCCAGAAAATGAAGCTCGGTGGGGCATCATTGATCTTGAGAAGCCCCTGAGCACGTCAAAAGTTGTTCCTGTCATTCTGTTTTTTCATGGTGGAAGCTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACGTTTTGCCGCCGCCTTGTAAGCATCTGCAAGGCGGTTGTAGTCTCAGTTAACTACCGTCGATCGCCCGAACACCGATATCCATGTGCGTACGAAGATGGCTGGGCTGCACTCAAATGGGTTAAGTCAAAAACATGGCTGCAAAGTGGGAAGGATTCTAAGGTTCATGTGTACTTGGCTGGAGACAGTTCTGGTGGCAACATTGCTCATCATGTTGCAGTGAGGGCAGCTGAAGAAGACGTCGAAGTATTAGGCAACATCCTTCTCCACCCGATGTTTGGGGGTGAAAAGAGAACCGAATCAGAGAAGAAACTCGACGGTAAATACTTTGTAACCATTCAAGACCGAGATTGGTACTGGAGAGCTTATCTCCCTGAAGGAGAGGACAGAGATCACCCAGCTTGCAACATTTTTGGCCCCAAAGCCAAAAGCATAATAGGACTCGAATTTCCTAAAAGTCTAGTTGTCGTTGCGGGTTTGGATCTGATGCAAGATTGGCAGCTCGCTTATGTGCAAGGCCTAAAAGACTCCGGTCACAATGTTAAACTTCTCTTCCTCGAGCAGGCGACAATCGGGTTCTACTTCTTGCCAAATAACGAACATTTCTACTGTCTAATGGAAGAGATAAACAATTTCATCAACCCTTAA 1029 47.13 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRSDGTFNRELAEYLERKVPANVFPVDGVFSFDHVDRASGLLNRVYQLAPENEARWGIIDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPMFGGEKRTESEKKLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNIFGPKAKSIIGLEFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHNVKLLFLEQATIGFYFLPNNEHFYCLMEEINNFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43123434 43125034 - Lag0002465.1 Lac4g2345 605877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2345 342 FunFam Gibberellin receptor GID1 1 342 - -
Lac4g2345 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Lac4g2345 342 PANTHER ARYLACETAMIDE DEACETYLASE 37 326 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Lac4g2345 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Lac4g2345 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
Lac4g2345 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787(InterPro)
Lac4g2345 342 SUPERFAMILY alpha/beta-Hydrolases 99 341 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g2412 Lac-Chr3:34540300 Lac4g2345 Lac-Chr4:43123434 1.30E-150 dispersed
Lac4g2345 Lac-Chr4:43123434 Lac6g0125 Lac-Chr6:1023405 2.40E-62 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2345 K14493 - csv:101219912 685.256