Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2402 ATGGAAGTCGATCGGACGGCCAATAACTTTCCCGACCTCCAAGAGAGCTCCGACGATTCTAGTCCGAACCTCGCAGAGAGAAAGCTCCGACGAAACGATTCTTTGGATGTTGAATCCCGCACCGTCCCCGGCGCCGGCGGCCACGGCCACAAGGCGGCGGCGGGGGCGAGCTGGGGAGTGATACTGCATCTGGCGTTTCAGAGCGTGGGAGTGGTGTACGGCGACATCGGAACGTCGCCGTTGTATGTGTATGCGAGTACTTTCACCGACGGAATCAAGCATAACGACGACGTTTTGGGTGTCCTTTCTTTGATTCTCTACACCCTCACTTTCATCCCTTTGCTTAAGTACGTCTTCCTTGTCTTGCAGGCCAACGACAACGGCGAAGGTGGGACATTTGCTTTATACTCTTTACTATGCCGATATGCAAAAATCGGGCTGATACCAAGCGAGCAAGTGGAAGATCAAGAGGTATCAAATTTTCAGTTGGAGCTGCCGAGCAACCGGCAGAGAATGGCGTCTTGCCTCAAGTCGAAGCTCGAAAACAGCAGCGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACGGCGTCCTCACTCCTTCCATCTCAGTTTTGTCGGCTGTTGGAGGAATAAAGAATGCTACCTCGACTATGACACAAGACAAAATAGTTTGGATATCAGCAGCAATCTTGGTTTGCCTGTTCATGGTGCAAAGATTTGGAACCCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCATTTGGTTTGCACTTATTGGTGGCATTGGCTTCTACAACTTTTTGAAATTTGACCCTGCTGTCATCAAAGCTGTAAATCCAAAATATATTTTTGACTACTTCAAAAGAAACAAAAAGGATGCTTGGATCTCTCTCGGTGGTGTCGTTCTTGCAATTACAGGGACGGAAGCTCTATTTGCGGACGTGGGGCACTTCACAGTGATGTCCATAAGACTAAGCATGTGCTGCGTGGCCTACCCCGCCCTCGTCTCCGCCTATGTTGGCCAAGCCTCCTTCCTTCGCAAGCACACTGACCTCGTCTCCGACACCTTCTTTAGCTCCATTCCAGGTCCTCTCTACTGGCCGACGTTCGTGGTGGCCGTGCTCGCCTCCATCGTAGCTAGCCAAGCCATGATCTCCGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATTGCTGCTTCCCTAGAGTTAAAGTTGTTCATACTTCTTCCAAGTATGAGGGGCAAGTTTACATCCCGGAAGTTAACTACCTTCTCATGTTGGCTTGTCTAGGAGTCACTCTAGGGTTTAAAGATACCACGAGAATCGGGAACGCCTACGGCATTGCAGTGGTGTTTGTTATGGCACTCACTTCAAGTTTTCTAGTGCTCATCATGATCATGATATGGAAATCTCACATACTTGTCATAATCTCCTATGCTCTCACCATTGGCTTATTGGAATTTTTCTATCTTAGTTCAGTCCTTTACAAGTTTGATCAAGGGGGCTATCTTCCTTTAGCTTTTGCTGGCTTTTTGATGACAATAATGTACATTTGGAATGATGTCCATAGAAGAAAATACTACTACGAACTTGAGCACAAAATTTCTCCTCAAAAGCTCAAGGACATTGCATCCCTCACGACCATCAATCGCGTCCCGGGCCTTGCCTTGTTCTACTCCGAGCTCGTCCAAGGCATTCCCCCAATCTTCAAGCATTATCTAGCCAACGTGCCGACTCTCCAAAGGGTCCTCGTTTTCGTGTCCTTCAAGTCCCTCCCGATAAGCAAAGTCCCAATGGAGGAGCGGTTCCTGTTTCGACGGGTGGAGCCTAATGACCTCAACGTGTTTCGCTGCGTGGTTCGATATGGATACAGAGATATCATCCACGAACAAGAGTCGTTCGAGAGAGTACTGGTGGAGAGATTGAAAGGGTTTATAGCGGAGGAGTCGTGGATGTTGCAAAACGACGACGAGAGAGCGGAGGAGAAGAGGAGGAGAGTGGAAGAGGAGATAGAGGTGGTGGATGAAGCTTGGAGAGATGGGATTGTTCACTTGATTGGACAAAATGAGGTTGTGGCAAGCAAAGGGTCAAGCTTAGCCAAAAGGGTTTTGATCAATTATGCATATAATGCATTGAGGAGGAACTTGAGACAAAATGAAGAGGTCTTTTACATTCCTCGCAAGCGTATGCTCAAAGTGGGAATGACTTATGAGCTTTAG 2253 48.38 MEVDRTANNFPDLQESSDDSSPNLAERKLRRNDSLDVESRTVPGAGGHGHKAAAGASWGVILHLAFQSVGVVYGDIGTSPLYVYASTFTDGIKHNDDVLGVLSLILYTLTFIPLLKYVFLVLQANDNGEGGTFALYSLLCRYAKIGLIPSEQVEDQEVSNFQLELPSNRQRMASCLKSKLENSSAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFLKFDPAVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQASFLRKHTDLVSDTFFSSIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYCCFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILVIISYALTIGLLEFFYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKDIASLTTINRVPGLALFYSELVQGIPPIFKHYLANVPTLQRVLVFVSFKSLPISKVPMEERFLFRRVEPNDLNVFRCVVRYGYRDIIHEQESFERVLVERLKGFIAEESWMLQNDDERAEEKRRRVEEEIEVVDEAWRDGIVHLIGQNEVVASKGSSLAKRVLINYAYNALRRNLRQNEEVFYIPRKRMLKVGMTYEL 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43563122 43568160 - Lag0002522.1 Lac4g2402 605934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2402 750 Pfam K+ potassium transporter C-terminal domain 564 750 IPR053952 -
Lac4g2402 750 MobiDBLite consensus disorder prediction 21 37 - -
Lac4g2402 750 Coils Coil 668 688 - -
Lac4g2402 750 MobiDBLite consensus disorder prediction 1 48 - -
Lac4g2402 750 NCBIfam potassium uptake protein 64 749 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac4g2402 750 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 37 749 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac4g2402 750 Pfam K+ potassium transporter integral membrane domain 64 550 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g0343 Lac-Chr11:3494361 Lac4g2402 Lac-Chr4:43563122 2.00E-92 dispersed
Lac11g0344 Lac-Chr11:3541095 Lac4g2402 Lac-Chr4:43563122 1.10E-301 dispersed
Lac4g2402 Lac-Chr4:43563122 Lac7g1530 Lac-Chr7:16960675 2.50E-229 dispersed
Lac4g2402 Lac-Chr4:43563122 Lac4g2403 Lac-Chr4:43577961 2.80E-297 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2402 K03549 - csv:101213493 1357.04