Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2403 ATGGCCGGAGAAGTAGAAATAGACGGCCACAATAAACAACAGCCGGTCACCAGCAGTCCCAAAATACTGTCATGGCCAAAACTACGCCGTTTTGACTCATTAGACATCGAGGCCAACAACCTGCACGGTGGCGCCACCGCGGCGGCGGCAGGGTGGTGGGTGACTCTGCAACTGGCGTTTCAGAGCCTGGGAATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCCGAGCACTTTTCCGGCGGGGATAAAGAACAAGGACGACGTTTTGGGAGTTTTGTCGTTGATTTATTATACGCTTACTTTGATCCCTCTGCTTAAATACGTCTTCGTCGTCTTGCAGGCTAACGACAATGGCGACGGAGGGACATTTGCATTGTATTCGTTACTTTGCCGATATGCAAGAATAGGGCTAATACCTAGCCAACAAGCTGAGGATCGGGAGGTTTCTAATTACCAATTGGACACTCCCAACAACCGTGTGCGGCGGGCCTCGTGGCTGAAGTCGTCGCTCGAGAGCAGCCGCGCCGCCAAGCTTTTTTTGCTCTTCGCCACCATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCGGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTGCACCTTCAATAACACAAGATACAATTGTGGGGATATCAGCAGGAATCTTGGTCTGCCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGATACACTTTTGCTCCAATCATATGCATTTGGTTCACTTGCATAGCTGGCATTGGCTTCTTCAATTTTATCAAGTTTGATCCTTCAGTCATCAAAGCTCTCAACCCTAAATATATTATTGACTATTTTAGAAGAAACAATACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCACAACAGGGACAGAAGCATTATTTGCTGATGTTGGACATTTCTCAGTGAGATCAATACAAATGAGCATGTGTGCAGTTACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCGCACTCACACTGATGATGTTGGAGACATCTTCTTCAAATCCATTCCAGGTCCTTTGTACCGGCCAATGTTTGTGGTGGCTGTCTTATCAGCCATTATTGCAAGCCAAGCTATGATTTCAGGAACATTCTCTGTAATTCAGCAATCCCTTTCACTTGGGTGTTTTCCACGAGTCAAAATTGTTCATACCTCAGCCAAGTATGAGGGCCAAGTTTATATCCCTGAAGTTAACTTTCTACTCATGCTTGCTTGTTTGGCTGTCACTTTAGGCTTCAAGGAGACTGAAAAGATAGGAAATGCCTATGGCATAGCTGTTGTGTTTGTAATGACTCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTGTCATTGGTTCAGTGGAGTTTCTATATTTGAGTTCAGTACTTTACAAGTTTGATCAAGGAGGATATCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTTCACTTGGAACACTGTCTACAGAAAAAAGTACCATTATGAGCTTGATAACAAGATCTCTTCTAATCAGCTCAAGGAAATTGTCTCAAATGCCAATCCTTATAGAGTTCCTGGCCTTGCCCTTTTCTACTCTGAGCTTGTGCAAGGGATTCCTCCCATTTTCAAGCTTTACATGGCCAATGTCCCCGCCCTTCACCACGTCCTCGTCTTCGTCTCGATCAAGTCCTTGCCTATAAGCAAGGTCCCATCCGACGAGCGGTTTCTCTTTCGCAGAGTCGAGCCGAGAGAGCTTAATATCTTTCGGTGCGTCGTGCGATATGGCTACACAGACGACCGAAACAACGAGCAGGAGCCGTTCGAGAGGAATTTGGTGGAGAGATTGAAAGGGTTTTTGAGGGATGATATTTGGGGTAGTATGGTGGAGGAGGAAGATGAGAATGTGGATGGTAGAGAGGAAGAATTGGAGAGGGAGATTGAGGAAGTGGATAAAGCTTGGGAAAACGGCGTCGTTCACTTGGTTGGAGAGAGTGAAATTGTTGCTAAGGAAGGATCCAACATTTGGAAGAGGGTTTTGATTGATTATGTTTACACTTTCTTGAAGAGAAATTTGAGACAAAGTGAGAAAGTTTTTGAGATTCCTCACAAACGTTTGCTCAAAGTGGGAATGACATATGAGCTTTAG 2244 44.88 MAGEVEIDGHNKQQPVTSSPKILSWPKLRRFDSLDIEANNLHGGATAAAAGWWVTLQLAFQSLGIVYGDIGTSPLYVFPSTFPAGIKNKDDVLGVLSLIYYTLTLIPLLKYVFVVLQANDNGDGGTFALYSLLCRYARIGLIPSQQAEDREVSNYQLDTPNNRVRRASWLKSSLESSRAAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRAAPSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPIICIWFTCIAGIGFFNFIKFDPSVIKALNPKYIIDYFRRNNTQAWISLGGIVLSTTGTEALFADVGHFSVRSIQMSMCAVTYPALLLAYTGQASYLRTHTDDVGDIFFKSIPGPLYRPMFVVAVLSAIIASQAMISGTFSVIQQSLSLGCFPRVKIVHTSAKYEGQVYIPEVNFLLMLACLAVTLGFKETEKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILVIGSVEFLYLSSVLYKFDQGGYLPLAFAFALMAIMFTWNTVYRKKYHYELDNKISSNQLKEIVSNANPYRVPGLALFYSELVQGIPPIFKLYMANVPALHHVLVFVSIKSLPISKVPSDERFLFRRVEPRELNIFRCVVRYGYTDDRNNEQEPFERNLVERLKGFLRDDIWGSMVEEEDENVDGREEELEREIEEVDKAWENGVVHLVGESEIVAKEGSNIWKRVLIDYVYTFLKRNLRQSEKVFEIPHKRLLKVGMTYEL 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43577961 43586124 - Lag0002523.1 Lac4g2403 605935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2403 747 Coils Coil 661 681 - -
Lac4g2403 747 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 45 746 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac4g2403 747 NCBIfam potassium uptake protein 58 746 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lac4g2403 747 Pfam K+ potassium transporter integral membrane domain 58 545 IPR053951 -
Lac4g2403 747 Pfam K+ potassium transporter C-terminal domain 558 747 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2403 Lac-Chr4:43577961 Lac7g1530 Lac-Chr7:16960675 1.60E-228 dispersed
Lac4g2402 Lac-Chr4:43563122 Lac4g2403 Lac-Chr4:43577961 2.80E-297 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2403 K03549 - csv:101204520 1192.18