Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2407 ATGGCGCCGCCCTTTGGCCAGATTCCAGTCCTAGAAGATGGTGATCTCACCCTATTTGAATCAAGAGCAATCACATCGTACATAGCGAACAAGTACAAGGAAACGGGGCCAGATCTCCTCCTACAGCAGCAGAGCCCCAAAGACAAAGAGTCTGCCATTGTGAAGCTGTGGATGGAGGTGGAGTCCCACCATTACAGCCCTGCAATCACTCCCATCATCCACGAGTTCTTCACCGCCCACCTTCAAGGCCACGAGCCCGACCGAGCCCTCATCGACCGGAACTTGGAGCGTCTAGCCGCCGTTCTCGACGTCTACGAGCAGCGCCTAGGCGGCACCAAGTACCTGGCCGGGCACTGCTACACCTTGGCCGATCTCCACCACCTTCCTTACACTTTCTACTTCATGAAGACGCCGTGGGCCTCGCTGCTCAATGATCGTCCCAACGTTAAGGCTTGGTGGGATCACATTTCTTCCCGCCCCGCCTTCCTTAAGGTCGCCCAAGGCATGAATTTTGCTGCTCATCATCACAACAAATGA 537 55.31 MAPPFGQIPVLEDGDLTLFESRAITSYIANKYKETGPDLLLQQQSPKDKESAIVKLWMEVESHHYSPAITPIIHEFFTAHLQGHEPDRALIDRNLERLAAVLDVYEQRLGGTKYLAGHCYTLADLHHLPYTFYFMKTPWASLLNDRPNVKAWWDHISSRPAFLKVAQGMNFAAHHHNK 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43610325 43612393 + Lag0002527.1 Lac4g2407 605939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2407 178 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 47 178 IPR010987 -
Lac4g2407 178 Gene3D Glutaredoxin 2 40 - -
Lac4g2407 178 CDD GST_C_Phi 49 166 IPR034347 -
Lac4g2407 178 FunFam Glutathione S-transferase F2 45 166 - -
Lac4g2407 178 SFLD Glutathione Transferase (cytosolic) 4 159 IPR040079 -
Lac4g2407 178 SUPERFAMILY GST C-terminal domain-like 27 171 IPR036282 -
Lac4g2407 178 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 36 IPR004045 -
Lac4g2407 178 SFLD Main (cytGST) 4 159 - -
Lac4g2407 178 Gene3D - 45 166 - -
Lac4g2407 178 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 168 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Lac4g2407 178 Pfam Glutathione S-transferase, C-terminal domain 72 160 IPR004046 -
Lac4g2407 178 Pfam Glutathione S-transferase, N-terminal domain 4 30 IPR004045 -
Lac4g2407 178 SUPERFAMILY Thioredoxin-like 4 33 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2407 Lac-Chr4:43610325 Lac4g2409 Lac-Chr4:43625171 2.90E-35 dispersed
Lac4g2407 Lac-Chr4:43610325 Lac4g2408 Lac-Chr4:43620196 9.30E-34 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2407 K00799 - vvi:100247639 240.35