Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2408 ATGGCCACCCCCATCAAAGTCCATGGAGTCCCCCTCTCCACCCCCACATGTAGAGTTCTGGCTTGTCTCTACGAGAAGGACCTCGAATTCGAGTTCATCAATGTCAAAATGCACCAAGGAGAACACAAGCAACAGCCCTTCCTCTCCATCAACCCCTTCGGTCAAGTCCCTGGTTTCCAAGATGGAGATTTGACGCTTTTTGAATCTCGAGCAATCACAAAGTACATATCGGAAAATTATGGTGGCAATGGAAGTCAGTTGATTTCTGAAGACCCCAAGAAAGCTGCGATGGTTTGGACGTGGATTGAGGTGGAAAGCCACCATTTTGACCCACCGGCGTCGAAGCTGCTGTTCGAGATCGGGTTGAAGCCTATGCTGGGGTGGGGCGAGACAGATGGTGCAGTGGTTGAGCAAAAGGAAGGTGAGTTAGCCAAAGTTCTTGATATCTATGAGAACAGGCTGGCTGAGTCCAAGTACTTGGCAGGGGAGTCCTTCACTTTGGCTGATCTGCACCATCTCCCAACTTTGAACTTCTTGTTGGGGGCACAGACCAAGAAACTGTTTGAGTCTCGGCCCCATGTCAATGCGTGGGCGGCTGATATCTTGGCCAGGCCTGCTTGGGCTAAGGTGCTTGCTATGCGCAAGTAA 648 50.93 MATPIKVHGVPLSTPTCRVLACLYEKDLEFEFINVKMHQGEHKQQPFLSINPFGQVPGFQDGDLTLFESRAITKYISENYGGNGSQLISEDPKKAAMVWTWIEVESHHFDPPASKLLFEIGLKPMLGWGETDGAVVEQKEGELAKVLDIYENRLAESKYLAGESFTLADLHHLPTLNFLLGAQTKKLFESRPHVNAWAADILARPAWAKVLAMRK 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43620196 43621011 - Lag0002528.1 Lac4g2408 605940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2408 215 Gene3D - 91 215 - -
Lac4g2408 215 SFLD Glutathione Transferase (cytosolic) 4 214 IPR040079 -
Lac4g2408 215 Gene3D Glutaredoxin 3 88 - -
Lac4g2408 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Lac4g2408 215 FunFam Glutathione S-transferase F2 4 88 - -
Lac4g2408 215 Pfam Glutathione S-transferase, C-terminal domain 122 205 IPR004046 -
Lac4g2408 215 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
Lac4g2408 215 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Lac4g2408 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 215 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Lac4g2408 215 SFLD Main.5: Phi-like 4 214 - -
Lac4g2408 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Lac4g2408 215 CDD GST_N_Phi 4 79 - -
Lac4g2408 215 FunFam Glutathione S-transferase F2 89 211 - -
Lac4g2408 215 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Lac4g2408 215 CDD GST_C_Phi 93 211 IPR034347 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2408 Lac-Chr4:43620196 Lac6g0548 Lac-Chr6:4569318 1.70E-50 dispersed
Lac4g2407 Lac-Chr4:43610325 Lac4g2408 Lac-Chr4:43620196 9.30E-34 tandem
Lac4g2408 Lac-Chr4:43620196 Lac4g2409 Lac-Chr4:43625171 8.10E-93 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2408 K00799 - csv:101212536 361.688