Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2409 ATGGCGATCAAAGTCCACGGAATCCCAGCTTCCACAGCCACTTGCAGGGTTCTTGCTGCCCTCTACGAGAAGGGGCTTCAATTCGAGCTTGTTAATGTCAAATTGCACGAAGGGGAACACAAGAGAGAGCCCTTCCTCTCGATCAATCCGTTCGGTCAAGTTCCTGGGTTCCACGATGGAGATCTGACGCTTTTTGAATCCAGAGCAATCACGCAGTACATCTCGGGAAATTACGCTAGTAATGGAACCCAGTTGATTTCCCAAGACCCCAAGAAAGCAGCCGTGGTATTAACATGGATCGAGGCCGAGAGCCACCATTTCGACCCAGTAGCCATGAAACTGGTGTTCGAGCACTGCTTGAAGCCACTTTTTGGGTTGGGAGATGCAGATTCTGCAGTGGTCGAGCAAAACGAGGCTGAGTTAGGCAAAGTTCTTGATATCTACGAGAATAGGCTGTCCGAATCCAAATACTTGGGAGGAGATTCCTTCAGTTTGGCTGATCTGCACCATCTCCCAGTATTAGGCTACCTGTTGGGAACACCATCCAAGAAACTGTTTGAATCACGGCCCCATGTCAATGCTTGGGTGGCTGATATCACAGCCAGGCCGGCTTGGGCTAAGATCTGTGACCATCTTCAGAAGAATTAG 648 49.69 MAIKVHGIPASTATCRVLAALYEKGLQFELVNVKLHEGEHKREPFLSINPFGQVPGFHDGDLTLFESRAITQYISGNYASNGTQLISQDPKKAAVVLTWIEAESHHFDPVAMKLVFEHCLKPLFGLGDADSAVVEQNEAELGKVLDIYENRLSESKYLGGDSFSLADLHHLPVLGYLLGTPSKKLFESRPHVNAWVADITARPAWAKICDHLQKN 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43625171 43626201 + Lag0002529.1 Lac4g2409 605941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2409 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Lac4g2409 215 SUPERFAMILY GST C-terminal domain-like 73 210 IPR036282 -
Lac4g2409 215 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Lac4g2409 215 Gene3D - 89 214 - -
Lac4g2409 215 FunFam Glutathione S-transferase F2 87 209 - -
Lac4g2409 215 SFLD Glutathione Transferase (cytosolic) 1 211 IPR040079 -
Lac4g2409 215 SFLD Main.5: Phi-like 1 211 - -
Lac4g2409 215 Gene3D Glutaredoxin 1 86 - -
Lac4g2409 215 CDD GST_C_Phi 91 209 IPR034347 -
Lac4g2409 215 CDD GST_N_Phi 2 75 - -
Lac4g2409 215 FunFam Glutathione S-transferase F2 2 86 - -
Lac4g2409 215 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Lac4g2409 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 214 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Lac4g2409 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 215 IPR010987 -
Lac4g2409 215 Pfam Glutathione S-transferase, C-terminal domain 114 203 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2407 Lac-Chr4:43610325 Lac4g2409 Lac-Chr4:43625171 2.90E-35 dispersed
Lac4g2408 Lac-Chr4:43620196 Lac4g2409 Lac-Chr4:43625171 8.10E-93 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2409 K00799 - csv:101212291 371.703