Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac4g2579 | ATGGACGATAGCTGTGCGGTTTGTGCCGATACTCTTGAATGGGTTGCCTATGGGTCTTGTGGCCATCGCGATGTCTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGCGGCGATCGCCGCTGTTGCATCTGCAAGTCGGAATCCGCCGTCGTGTTCGTCACTAAGGCCTTAGGAGATTATACAAGGACAATCAATGACTTCGCAGTCTTTCCTTCTGAACCAAGAGAAGGTCGTAATGGATCCTATTGGTATCATGAAGACACACAGACATTTTTTGATGATGTTGACCACTACAAGATGATAAAAGCAATGTGCAGGTTGTCATGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGGCTCTAAGCGCCGAGGAAGATTTCGGAACATTGAGCAGCTAAAGGGCCATTTGTTTCATCGCCATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGAAGAAAGGTTTTTATTTGTGAACAGAAGCTATATAATAGAGCACAATTGAATCAGCATATACACACTGGTGACTCCGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTCACTGGGCATCCTATGTGTGAATTTTGCAGAACTCCTTTTTACGGAGATAATGAGCTGTATACTCATATGTCGACTGAGCATTATACATGTCATATATGTCAAAGGCTCCATCCTGGGCAGTATGAATACTATAAGAATTATGACGACCTAGAGATCCATTTCCGACAAGGACATTTTCTTTGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTTATAGTGTTCCAATCTGAAGCAGAAATGAAGAGGCATAATACTATTGAGCATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAACGAGCAGGATAATCGCCGTGGTAGACGGACATTTCGTCGTGATTCTTCTGACGATCTACTTTCTTTAGCCATTCAAGAAAGTTTTGAATCAGCCAATGTTGATGACACCAATCATGACTCATTACCTGGCGGACAAGTAGCCTCGGATCAGGGAAATCTAAGCAACATTGATCCTTTAGTTGAACCATTTGAATCATTAGCAACAACAGATGCCGAATCAGCTTCTAGATACCTTCAAGCCTTGGGCCATTCTAGGAATTCCCAATTGGGGCAATCGTCCTTTCCACCCCTTTCCACAGCACCTAGCAGCAGCCATCCAAAGCCCATGCAGGACAAAGACGCTATACATAATAACAGTATGGCAGCTCATCTTCGCCGCCAGAGGAATGTGACTGTTCTGAATTCTGCTCAAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGCCACCATCAAATAATTCATCTCAAGCTTGGCCTGCAATAAATGTTAATCATCCAGCGTCAAGCAGTTCTGGGCAGACTAAGAGTGTTGTCACCATCAATAATGGCTCTTCAGTCTCTGGTTACTCAAATGTTGCTCAGGTGCATGCGAAGGCTCGATCTAGTTCTTCAAGTGGATCAGGTAGTAGCAGTAGGATCAGTCACTCTGCTTCCGCTCCCAGTCTCACCGACATGGCCTATACTGAACCCTCAGTTAATGAATTCCCTCCAGTTTCCGCAGCACAGGCTCGGAAGGTGCCCTCAAGTAGCCAGAGTTCAATGAACATGGAAGATGTCCAGACAGCAAACAAATCTCTAGTTGAAAAGATACGCGCTGCTCTTGATTTTGACCCAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACGGAAATGTATCTAGACTGTGTGCAGCAGTTCGGTCTGTCACATCTTGTGCTTGAGCTGGCTAGGCTCTGTCCTGATACTCAGAAACAGAAAGAACTTGTGGAGACCTATAAAGCTAGTTTACATAAAGATGTGGTCCAAGAAAATGGTAGGGCTCAAGATAGTATTCAATTTAAAGACAGAAGTAAAGGAAAGAAAGGTAAAGGGAAGTCTATGGATGTTGTTAAGGACAGCACATCCAAGGACAAATTTGCCGATAGTATCTTGAGTAGTGTTCGGGAACTGCAGTCAAGTTTGAGGCCATCGGAGGAGAATGTAGAGGTATTGTCAAAGGGTGACTACCGTGCTGCGAAAGGGAAATCGAAGTTATCATCTGACGACCAACAAGGTGGGATAGGAGGCCAAAACAGTCAACCGTCTACTGGTTTATCGAACCAAAGCACCGGGGATGGGGGTGGGGGGAGCAAGCAGAAAAAGAAAACTTCGAAGTTCCATAGAGTTCGTTTAGGTGATGGTTCAGTTGCTGCACTTCTAGATTTAAAGAACTCCAATCCCGAACCTGACCCGGTAGAAAGAGTAGAGGACAGGGACAATGCTGGGGCATTGCCTGTTCGGGGCGTGTGGAGAAATGGTGCTCAGAAGCTTTTCTCCTAA | 2460 | 44.92 | MDDSCAVCADTLEWVAYGSCGHRDVCSTCVARLRFICGDRRCCICKSESAVVFVTKALGDYTRTINDFAVFPSEPREGRNGSYWYHEDTQTFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDGSKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQGHFLCEDEACLAKKFIVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSDDLLSLAIQESFESANVDDTNHDSLPGGQVASDQGNLSNIDPLVEPFESLATTDAESASRYLQALGHSRNSQLGQSSFPPLSTAPSSSHPKPMQDKDAIHNNSMAAHLRRQRNVTVLNSAQGWPKSSRAPVPPSNNSSQAWPAINVNHPASSSSGQTKSVVTINNGSSVSGYSNVAQVHAKARSSSSSGSGSSSRISHSASAPSLTDMAYTEPSVNEFPPVSAAQARKVPSSSQSSMNMEDVQTANKSLVEKIRAALDFDPDRYAIFKDISAQYRQGQIDTEMYLDCVQQFGLSHLVLELARLCPDTQKQKELVETYKASLHKDVVQENGRAQDSIQFKDRSKGKKGKGKSMDVVKDSTSKDKFADSILSSVRELQSSLRPSEENVEVLSKGDYRAAKGKSKLSSDDQQGGIGGQNSQPSTGLSNQSTGDGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNSNPEPDPVERVEDRDNAGALPVRGVWRNGAQKLFS | 819 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 44928191 | 44933016 | + | Lag0002699.1 | Lac4g2579 | 606111 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 444 | 484 | - | - | |
Lac4g2579 | 819 | ProSiteProfiles | Zinc finger RING-type profile. | 5 | 46 | IPR001841 | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 787 | 801 | - | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 725 | 757 | - | - | |
Lac4g2579 | 819 | PANTHER | ZINC FINGER PROTEIN 598 | 1 | 813 | IPR044288 | GO:0016567(PANTHER)|GO:0043022(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)|GO:0072344(InterPro)|GO:0072344(PANTHER) | |
Lac4g2579 | 819 | CDD | RING-HC_ZNF598 | 3 | 53 | IPR041888 | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 337 | 363 | - | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 337 | 361 | - | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 391 | 419 | - | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 391 | 412 | - | - | |
Lac4g2579 | 819 | SMART | c2h2final6 | 221 | 251 | IPR013087 | - | |
Lac4g2579 | 819 | SMART | c2h2final6 | 108 | 145 | IPR013087 | - | |
Lac4g2579 | 819 | SMART | c2h2final6 | 197 | 220 | IPR013087 | - | |
Lac4g2579 | 819 | SMART | c2h2final6 | 252 | 281 | IPR013087 | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 654 | 679 | - | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 718 | 819 | - | - | |
Lac4g2579 | 819 | MobiDBLite | consensus disorder prediction | 502 | 526 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac4g2579 | K22381 | - | csv:101214376 | 1405.96 |