Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2579 ATGGACGATAGCTGTGCGGTTTGTGCCGATACTCTTGAATGGGTTGCCTATGGGTCTTGTGGCCATCGCGATGTCTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGCGGCGATCGCCGCTGTTGCATCTGCAAGTCGGAATCCGCCGTCGTGTTCGTCACTAAGGCCTTAGGAGATTATACAAGGACAATCAATGACTTCGCAGTCTTTCCTTCTGAACCAAGAGAAGGTCGTAATGGATCCTATTGGTATCATGAAGACACACAGACATTTTTTGATGATGTTGACCACTACAAGATGATAAAAGCAATGTGCAGGTTGTCATGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGGCTCTAAGCGCCGAGGAAGATTTCGGAACATTGAGCAGCTAAAGGGCCATTTGTTTCATCGCCATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGAAGAAAGGTTTTTATTTGTGAACAGAAGCTATATAATAGAGCACAATTGAATCAGCATATACACACTGGTGACTCCGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTCACTGGGCATCCTATGTGTGAATTTTGCAGAACTCCTTTTTACGGAGATAATGAGCTGTATACTCATATGTCGACTGAGCATTATACATGTCATATATGTCAAAGGCTCCATCCTGGGCAGTATGAATACTATAAGAATTATGACGACCTAGAGATCCATTTCCGACAAGGACATTTTCTTTGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTTATAGTGTTCCAATCTGAAGCAGAAATGAAGAGGCATAATACTATTGAGCATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAACGAGCAGGATAATCGCCGTGGTAGACGGACATTTCGTCGTGATTCTTCTGACGATCTACTTTCTTTAGCCATTCAAGAAAGTTTTGAATCAGCCAATGTTGATGACACCAATCATGACTCATTACCTGGCGGACAAGTAGCCTCGGATCAGGGAAATCTAAGCAACATTGATCCTTTAGTTGAACCATTTGAATCATTAGCAACAACAGATGCCGAATCAGCTTCTAGATACCTTCAAGCCTTGGGCCATTCTAGGAATTCCCAATTGGGGCAATCGTCCTTTCCACCCCTTTCCACAGCACCTAGCAGCAGCCATCCAAAGCCCATGCAGGACAAAGACGCTATACATAATAACAGTATGGCAGCTCATCTTCGCCGCCAGAGGAATGTGACTGTTCTGAATTCTGCTCAAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGCCACCATCAAATAATTCATCTCAAGCTTGGCCTGCAATAAATGTTAATCATCCAGCGTCAAGCAGTTCTGGGCAGACTAAGAGTGTTGTCACCATCAATAATGGCTCTTCAGTCTCTGGTTACTCAAATGTTGCTCAGGTGCATGCGAAGGCTCGATCTAGTTCTTCAAGTGGATCAGGTAGTAGCAGTAGGATCAGTCACTCTGCTTCCGCTCCCAGTCTCACCGACATGGCCTATACTGAACCCTCAGTTAATGAATTCCCTCCAGTTTCCGCAGCACAGGCTCGGAAGGTGCCCTCAAGTAGCCAGAGTTCAATGAACATGGAAGATGTCCAGACAGCAAACAAATCTCTAGTTGAAAAGATACGCGCTGCTCTTGATTTTGACCCAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACGGAAATGTATCTAGACTGTGTGCAGCAGTTCGGTCTGTCACATCTTGTGCTTGAGCTGGCTAGGCTCTGTCCTGATACTCAGAAACAGAAAGAACTTGTGGAGACCTATAAAGCTAGTTTACATAAAGATGTGGTCCAAGAAAATGGTAGGGCTCAAGATAGTATTCAATTTAAAGACAGAAGTAAAGGAAAGAAAGGTAAAGGGAAGTCTATGGATGTTGTTAAGGACAGCACATCCAAGGACAAATTTGCCGATAGTATCTTGAGTAGTGTTCGGGAACTGCAGTCAAGTTTGAGGCCATCGGAGGAGAATGTAGAGGTATTGTCAAAGGGTGACTACCGTGCTGCGAAAGGGAAATCGAAGTTATCATCTGACGACCAACAAGGTGGGATAGGAGGCCAAAACAGTCAACCGTCTACTGGTTTATCGAACCAAAGCACCGGGGATGGGGGTGGGGGGAGCAAGCAGAAAAAGAAAACTTCGAAGTTCCATAGAGTTCGTTTAGGTGATGGTTCAGTTGCTGCACTTCTAGATTTAAAGAACTCCAATCCCGAACCTGACCCGGTAGAAAGAGTAGAGGACAGGGACAATGCTGGGGCATTGCCTGTTCGGGGCGTGTGGAGAAATGGTGCTCAGAAGCTTTTCTCCTAA 2460 44.92 MDDSCAVCADTLEWVAYGSCGHRDVCSTCVARLRFICGDRRCCICKSESAVVFVTKALGDYTRTINDFAVFPSEPREGRNGSYWYHEDTQTFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDGSKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQGHFLCEDEACLAKKFIVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSDDLLSLAIQESFESANVDDTNHDSLPGGQVASDQGNLSNIDPLVEPFESLATTDAESASRYLQALGHSRNSQLGQSSFPPLSTAPSSSHPKPMQDKDAIHNNSMAAHLRRQRNVTVLNSAQGWPKSSRAPVPPSNNSSQAWPAINVNHPASSSSGQTKSVVTINNGSSVSGYSNVAQVHAKARSSSSSGSGSSSRISHSASAPSLTDMAYTEPSVNEFPPVSAAQARKVPSSSQSSMNMEDVQTANKSLVEKIRAALDFDPDRYAIFKDISAQYRQGQIDTEMYLDCVQQFGLSHLVLELARLCPDTQKQKELVETYKASLHKDVVQENGRAQDSIQFKDRSKGKKGKGKSMDVVKDSTSKDKFADSILSSVRELQSSLRPSEENVEVLSKGDYRAAKGKSKLSSDDQQGGIGGQNSQPSTGLSNQSTGDGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNSNPEPDPVERVEDRDNAGALPVRGVWRNGAQKLFS 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 44928191 44933016 + Lag0002699.1 Lac4g2579 606111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2579 819 MobiDBLite consensus disorder prediction 444 484 - -
Lac4g2579 819 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Lac4g2579 819 MobiDBLite consensus disorder prediction 787 801 - -
Lac4g2579 819 MobiDBLite consensus disorder prediction 725 757 - -
Lac4g2579 819 PANTHER ZINC FINGER PROTEIN 598 1 813 IPR044288 GO:0016567(PANTHER)|GO:0043022(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)|GO:0072344(InterPro)|GO:0072344(PANTHER)
Lac4g2579 819 CDD RING-HC_ZNF598 3 53 IPR041888 -
Lac4g2579 819 MobiDBLite consensus disorder prediction 337 363 - -
Lac4g2579 819 MobiDBLite consensus disorder prediction 337 361 - -
Lac4g2579 819 MobiDBLite consensus disorder prediction 391 419 - -
Lac4g2579 819 MobiDBLite consensus disorder prediction 391 412 - -
Lac4g2579 819 SMART c2h2final6 221 251 IPR013087 -
Lac4g2579 819 SMART c2h2final6 108 145 IPR013087 -
Lac4g2579 819 SMART c2h2final6 197 220 IPR013087 -
Lac4g2579 819 SMART c2h2final6 252 281 IPR013087 -
Lac4g2579 819 MobiDBLite consensus disorder prediction 654 679 - -
Lac4g2579 819 MobiDBLite consensus disorder prediction 718 819 - -
Lac4g2579 819 MobiDBLite consensus disorder prediction 502 526 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2579 K22381 - csv:101214376 1405.96