Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2613 ATGAAGAGGTGTGGAGTCGGAGTTGCTGGACACGCCGGAGTCGTTGGAGTCGTCGGAGTCGAACGAGAGAGAAAGAACTGTCGGAGCCGTTGGAACGAGATTGTTAGAAATTTCATATATCGAAAGCTCGAGCAAGTTTATGCTATGGCGGAATCAGAGCGTCGGGCTAAACGCCCTAGAATTATGAGGGGGGAAGATGATTATATGCCTGGAAGTATAATTGAGATCGAGCTTCATAACTTTATGACCTTTAACCACTTGAAATGTAAACCAGGATCACGTTTGAACCTTGTAATTGGGCCCAATGGATCTGGTAAAAGCTCTATTGTGTGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCGACCAGCGTTGGAGCATATGTGAAGCGTGGGGAGGAGTCTGGTTATGTTAGAATAACCTTGAGAGGGAATACTAAAGAGGAGAAGATTACAATTACACGTAAAATGGACACACACAACAAATCTGAGTGGTTGTTCAATGGAAAAGTTGTGCCCAAAAAAGATGTAGCTGCAATCATTGAAAGGTTTAACATTCAAGTTAATAATTTGACTCAATTTTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAGCTAACTCCTGTGCAACTTCTAGAAGAGACTGAAAAGGCAGTTGGTGATCCTCAACTTCCAATCCTACATCGTGCACTTGTTGAGAAAAGCCATGACATAAAAAATATAGAACGAGCTGTTGAGAAAAATGGAGACACCCTAGATCAGCTAAAGGCATTAAATGCCGAGCAGGAAAAAGATGTTGAGCGTGTTCGTCAAAGAGATGAACTTTTAAAAAAGATTGAGTCCATGAAAAAGAAACTGCCATGGCTGAAGTATGACATGAAAAAGGCTGAATACATAGAAGTTAAGGAAAAGGAAAAGGAGGCCAAAAAGAAGTTGGATGAAGCTGCTAACACTTTGAATGATTTAAAGGAGCCAATTGAGAAACAAAAAATGGAGAAGGCAAAGTTGGATGCTAAAACTAAAAAGTATAGCACTCTCATTAATGACAATCACAAGAGAAGGATGGAACTTCAAGAAACTGAAAACCATTTGGGGGTACAAGTGCAAGGAAAATTGAAAGAAATGGAAGACTTAAGGAAACAAGAAGAATCTCGTCAACAGAGAATCTTACAAGCTAAGCAGGAACTTGAAGCCGCTGAATTAGAACTTCAGAACTTGCCTCCTTACGAACATCCCAAGGATGAGATTGAACGGTTGCGTGCTCAAATTTTAGAGCTGGAAGTTTCTGCGAGTCAGAAGAGACTTATGAAGTCAGATATTGAAAAAAATATATCCCAAAAAAGAATTACTTTGAGGCAATGCTTGGATAGGTTAAAGGATATGGAGAATACTAATACAAAACTACTACAGGCATTGAAAAATTCTGGAACAGAGAAGATTTTTGAAGCTTATCATTGGCTTCAAGAACATCGCCATGAGTTCAAGAAGGAGGTTTATGGTCCAGTGTTGCTTGAGGTTAATGTGTCAAATCGGACTCATGCTGACTACTTAGAAGGTCATATTCCATCCTATGTCTGGAAGTCCTTCATAACTCAAGATTCTGATGATCGTGATATTATGGTAAAAAACTTGGGCTCATTCGGCGTTCCTATCTTAAACTTTGTGGGAGGTGAAAGGCGCACAAATCAGCATTTTGAGGTTTCTGAGGAGGTTCGTGCATTTGGCATATATTCCCGGCTAGACCAAGTTTTTGATGCTCCTGCAGCTGTAAAGGAGGTTTTGACCATGCAGTTTGGTTTGGAACATTCATATATTGGTTCAAAGGTAACTGATCAGAAGGCAGATGAGGTCTCAAAATTGGGAATTTTAGATTTTTGGACTCCAGATAATCATTATCGATGGTCTCGCTCTAGATACGGTGGTCATATGTCTGGAAGTGTGGAGCCAGTTGATCGCTCACGTCTTCTTTTGTGCAACTTGGATGCGGGAGAAATCGATGGGCTTCGATCCAGGAAAAATGAGCTAGAAGAAGCTGTTTCTGTATTAGAAGATAACTATAAATCATGTCAGAATGAGCTAAGATTGATAGAAGATGAAGAAGCTAAACTTCGCAAACACCGGGATGACATTATAAATACTGTGCAACATGAAAAGAGAAAGCGCCGTGAAATGGAAAATCGCATCGATCAAAGGAAAAAGAAATTAGAATCTATGGAGCAGGAAGATGACCTGGATACTGTTGTGGCCAAGCTTGTTGACCAAGCTGCAAATTTTAACATCCAAAGGTTCCATTGTGCAATTAAAATTAAGCATTTGCTTGTTGAGACCGTTTCTTATAGACAGAGCTTGACTAAGAACCATATGTCCTCCATAGAAATTGAAGCAAAGATCAGAGAATTGGAGGCAAATCTGAAGCAGCACGAAAAGTTTGCTCTGCAAGCATCAGTGCAGTTCGAGTACTGCAAGAAGGAAGTCGAGGACTATCGACAGCAACTTTCAGTTGCCAAGAAGCATGCAGAATCTATTGCTGTGATCACACCTGACCTTGAGAAAGAATTTCTTGAGATGCCTACTACCATTGAGGAATTGGAGGCTGCTATTCAAGATAATATTTCTCAAGCTAATTCCATTCTATTCTTGAACCATAATGTGCTTGAGGAATATGAACATCGTCAGCGTCAGATAAATACCATTGCGCGGAAACTAGAAGCTGATAAACATGAACTAAGGAAGTGTATGGCTGACGTTGATGAGCTAAAGGGAAATTGGCTCCCAACATTAAGAAGACTTGTTTCTCAGATAAATGAGACTTTCAGTCGAAATTTTCAAGAGATGGCTGTTGCTGGGGAAGTGTTATTGGATGAGCATGATATGGACTTTGATCAGTTTGGGATACTTATTAAAGTAAAGTTCAGACAAGCAGGTCAGCTTCAGGTTCTCAGTGCACATCATCAATCTGGAGGGGAACGCTCGGTGTCGACAATTCTGTATCTTGTTTCCCTTCAAGACCTTACCAACTGCCCATTTAGAGTAGTTGACGAGATAAACCAAGGAATGGATCCCATTAATGAACGGAAGATGTTCCAGCAATTGGTGAGAGCTGCCAGCCAAACGAATACACCACAGTGTTTCCTACTTACTCCAAAGTTACTTCCAGAACTGGAATATAGTGAGGCCTGTAGTATACTGAATATAATGAATGGTCCTTGGATCGAGCAGCCCTCTAGAGCATGGAGCAATGGAGATAGCTGGGGAACGTTGATGAACTATGTAGGAGAAAGCCGATGTTGA 3306 41.05 MKRCGVGVAGHAGVVGVVGVERERKNCRSRWNEIVRNFIYRKLEQVYAMAESERRAKRPRIMRGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTHNKSEWLFNGKVVPKKDVAAIIERFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRALVEKSHDIKNIERAVEKNGDTLDQLKALNAEQEKDVERVRQRDELLKKIESMKKKLPWLKYDMKKAEYIEVKEKEKEAKKKLDEAANTLNDLKEPIEKQKMEKAKLDAKTKKYSTLINDNHKRRMELQETENHLGVQVQGKLKEMEDLRKQEESRQQRILQAKQELEAAELELQNLPPYEHPKDEIERLRAQILELEVSASQKRLMKSDIEKNISQKRITLRQCLDRLKDMENTNTKLLQALKNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPSYVWKSFITQDSDDRDIMVKNLGSFGVPILNFVGGERRTNQHFEVSEEVRAFGIYSRLDQVFDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHMSGSVEPVDRSRLLLCNLDAGEIDGLRSRKNELEEAVSVLEDNYKSCQNELRLIEDEEAKLRKHRDDIINTVQHEKRKRREMENRIDQRKKKLESMEQEDDLDTVVAKLVDQAANFNIQRFHCAIKIKHLLVETVSYRQSLTKNHMSSIEIEAKIRELEANLKQHEKFALQASVQFEYCKKEVEDYRQQLSVAKKHAESIAVITPDLEKEFLEMPTTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQRQINTIARKLEADKHELRKCMADVDELKGNWLPTLRRLVSQINETFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACSILNIMNGPWIEQPSRAWSNGDSWGTLMNYVGESRC 1101
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45166423 45183098 - Lag0002733.1 Lac4g2613 606145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2613 1101 Gene3D - 895 1070 IPR027417 -
Lac4g2613 1101 Coils Coil 456 476 - -
Lac4g2613 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 797 1052 IPR027417 -
Lac4g2613 1101 Pfam RecF/RecN/SMC N terminal domain 73 1040 IPR003395 -
Lac4g2613 1101 Gene3D - 72 262 IPR027417 -
Lac4g2613 1101 Coils Coil 795 815 - -
Lac4g2613 1101 Coils Coil 300 327 - -
Lac4g2613 1101 Coils Coil 670 746 - -
Lac4g2613 1101 Coils Coil 377 407 - -
Lac4g2613 1101 Coils Coil 890 910 - -
Lac4g2613 1101 FunFam Structural maintenance of chromosomes 5 897 1068 - -
Lac4g2613 1101 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 49 1093 IPR027131 GO:0000724(PANTHER)|GO:0000724(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(InterPro)|GO:0030915(PANTHER)
Lac4g2613 1101 Coils Coil 243 277 - -
Lac4g2613 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 1044 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2613 Lac-Chr4:45166423 Lac5g2789 Lac-Chr5:46257544 2.20E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2613 K22803 - csv:101210248 1949.87