Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2643 ATGGCGAGGACTAGGGTTCATGAGCCATCGCGAATGTTAGCACGTAATACATGCACGATTCGGCTGACTGAAATTTTCGGGAGGGCGACCAGGTCTATTTTGGGCTTCTTTCTCATGGTGGGTCTCTGCAATGGCGTGCATTACCTTTTGAAGTCCTTCTCTCAACCTCGCATTACCTCTGATACGATTGTAGGTTTGGTTGTTGGCAACTTCATGAGGAAAGGACTTGATCTATCGACGATTAAGACACTGCGTTATATCGTTGACTTTGGTATGATATGCTATATGTTTGTACTGGGATTGGAGATGGATCCACATGTACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTATGCTGGAATGATTTCGACACTCGTCTTAGCCTGTTCCATAACCCCATTTGTCAGCTTTTCAAAGACAAAAGAGATCAGTTTCATTCTCTCCCTCTCAACTGTCCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATCACCGATCTTAAAATAGGCAAGTCAGATATAGGCCGCCTCGTTATTGCTGCTGGGATGCATTCTGATTTTATATCCACTCTCATTATCTGTATCGGTTATCTCTTTTGCAAATGTCAAGAGACACGCATCTCCTTAATAAAAGGTTTTCAACTAGGTGTTATGTTACTGATCCAGTCAGTAATCACAGCGAAGGTTTCACCGGTATTCATGAACTGGGTAAATAATGAAAACCCCGAAGGTAAGCCTATGAAAGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTTCTTTGCAGCTGCCCTACTATATTTGGTTACAATCCGATTCTCAGTGCATTCTTAGCTGGAACGTTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGCAATTGGAAAAATTAACTACCTGCTTACTACCATTTTCTATCCCATCTTCTTCTTTTGGATGGGGGTTGAATGCAAGTTGAGTGACTTTGAACCTGGACAATTAATGACATGGGTCAGGTTAATTCTGCTTTTTGCTATTGCAACTGTAGGAAAAGTTGTTGGTACTGTCATTGCTGGCGCAATTTTGGGATTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCATATATACTTAGCCATTGCTGCAAGAACCGCTGGAAAGACGACTACATCTACAAGCATTGTGATGGTAACTGTAATCTTCTTCACAATCGTGCATGCTCCAAAAGTTGTAGCACATATAATCAAAAGGGCGAGGAAACGCACACCTACACATCGAATGGCACTCCAATTGCTTGATCCATCAAGTGAGCTTAGGATTTTGCTGTGTGTACATGGACCTCAGAACACTCCAGCAGCCATTAACATTATGGAGATCTCTCGAGGGACAGCTAACCCTGGAGTTGTTGTCTATGTCACAGACATGATTGAACTTACAGATGAAATAGCAGCCACATTAGTGCAAGGTGAAGGAGTGGACACCGTGACTGTAACCCACACCGGAGTGACACAAATAAGAGACCAAGTTACCGCTGCAGTTCAGAGCTATGTAGATGAAAATGGAGAAGGAATTACCCTCAGAAGAATGTTAGCTCTCTCAACACTCAATTCTATGGCTCAAGACATTTGCATTTTGGCAGAGGAATTGATGGGAGCTCTTATCATACTGCCATTTCACAAGATCCCCCGTGGAGATGGGTCGTTGAGTGAGGGCCACACAGGTTTCCGCTACGTAAACCGCAAGGTTCTCAGGAATGCCCCCTGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGATCAGTAGAGAAAATTTCAAGGTCGTATGTATCTCAGAATGTGGCAGTCATCTTCATTGGTGGTAAAGATGACCGAGAAGCATTAGCCTACGCAGGTCGAGTTGCAAGGCATCCAGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGATGCAGAAAATGCTGCAAGAAGAGCTGGGACTTACAGGATAAGTGTTGCTGAGCAGGAAGAGGAAATGAGACTAGACGATGAATGCTTTGCTTATTTTTATGAACGACATGTGGCTGGTGGGCATGTTGCTTATGTCGAAAAACACCTTGCCAGTTCCTCCGAGACGTATTCTACTTTGAAATCATTTGAAGGGCAATATGCACTCATAATCGTCGGTCGAGGTGGAGGTGGAAGAGTCAACTCAGTGCTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTGGGTCCTATAGGGGATGTTCTTTCCGGGTCTGAATTCTCTGTTAGGACCTCAGTTTTGATCATCCAACAACACAATCTAAAAGGAGAACTAGATGGACTTGATGACGATTTTTCAATTATGTAG 2379 43.93 MARTRVHEPSRMLARNTCTIRLTEIFGRATRSILGFFLMVGLCNGVHYLLKSFSQPRITSDTIVGLVVGNFMRKGLDLSTIKTLRYIVDFGMICYMFVLGLEMDPHVLFKAPTRDAKVAYAGMISTLVLACSITPFVSFSKTKEISFILSLSTVLSSTASPVLTRLITDLKIGKSDIGRLVIAAGMHSDFISTLIICIGYLFCKCQETRISLIKGFQLGVMLLIQSVITAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCSCPTIFGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLTTIFYPIFFFWMGVECKLSDFEPGQLMTWVRLILLFAIATVGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAIAARTAGKTTTSTSIVMVTVIFFTIVHAPKVVAHIIKRARKRTPTHRMALQLLDPSSELRILLCVHGPQNTPAAINIMEISRGTANPGVVVYVTDMIELTDEIAATLVQGEGVDTVTVTHTGVTQIRDQVTAAVQSYVDENGEGITLRRMLALSTLNSMAQDICILAEELMGALIILPFHKIPRGDGSLSEGHTGFRYVNRKVLRNAPCSVGILVDRGLGSVEKISRSYVSQNVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDADAENAARRAGTYRISVAEQEEEMRLDDECFAYFYERHVAGGHVAYVEKHLASSSETYSTLKSFEGQYALIIVGRGGGGRVNSVLTFGMNDWQQCPELGPIGDVLSGSEFSVRTSVLIIQQHNLKGELDGLDDDFSIM 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45419195 45423531 + Lag0002763.1 Lac4g2643 606175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2643 792 Gene3D - 443 744 - -
Lac4g2643 792 FunFam Cation/H(+) antiporter 28 30 429 - -
Lac4g2643 792 Gene3D - 29 429 IPR038770 -
Lac4g2643 792 PANTHER CATION/H + ANTIPORTER 36 777 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Lac4g2643 792 Pfam Sodium/hydrogen exchanger family 49 419 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2643 Lac-Chr4:45419195 Lac9g0210 Lac-Chr9:3239579 3.70E-90 dispersed
Lac4g2643 Lac-Chr4:45419195 Lac9g2349 Lac-Chr9:42755250 1.20E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2643 K26731 - csv:101211645 1404.81