Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac4g2661 | ATGGCTGATCAGGTTCAACATCCCACCATTTATCAGAAGGTTGCTGGTCAGCTTTCCCTTCAGTCGAGGGTTGCTTCAGGTTTTCGTGCTGGTGATGATGGCTTTAGGAACCCTGCACTTTACCAGAGACGCGCTTCAGTCAGCAATTATTCAAATGCTGCTTTCCAATATCCTGCCATGCAATCCTCTGTTGCTACGACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTCGTCGCCGCCCCTGCAGAGAAAGGACACTTTCTGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTATCCAAGACAGCCGCTGCCCCGATCGAGCGTGTCAAACTCTTAATCCAAAATCAGGATGAGATGATTAAAGCTGGACGTCTATCTGAGCCATACAAGGGTATTGGTGACTGTTTTAAACGTACAATTCAAGAGGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAGGATAAGGACGGTTACTGGAAATGGTTTGCCGGTAACCTGGCGTCCGGTGGTGCAGCTGGTGCTTCGTCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGGTTGGCAAACGATGCCAAGGCTGCCAAGAAAGGTGGTGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGAAAGACATTGCAGTCTGATGGTGTTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATTGTTTACCGTGGTTTGTACTTTGGAATGTACGATTCTTTGAAGCCCGTTGTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGCTTTGCCCTCGGTTGGCTCATCACCAACGGTGCCGGGCTTGCATCCTACCCAATTGACACAGTTCGCAGAAGAATGATGATGACATCTGGTGAAGCAGTCAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCTGGTGCCAACATTCTGCGTGCCGTTGCGGGTGCTGGTGTGCTTGCCGGTTACGACAAGTTGCAGAGCGAAACCCTCTCTCCGCCTGAAATATTCGCTCATTTCGAACGCGACATTCTAGCCGCGGCGGACTCCTCCAAAATTTCCTCGCGGCCATCAGTTTTCTCCCAAGTTTACGACTCCACGGACTTCAATTGGTCGGATTCATTGTTGGTTCTATTATACTCATTTCTAGATCAAGATCTGGAAGAATTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTTTCTCTTCAGTCAAGGGTTGCTTCAGGTTTCCGTGCTGGTGATGATGGCTTTAGGAACCCTGCACTTTACCAGAGACGTGCTTCAGTCAGCAATTATTCAAATGCTGCTTTCCAATATCCTGCCGTGCAATCCTGCGTTGCTACAACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTCGTCGCCGCCCCTGCAGAGAAAGGACACTTTCTGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTATCCAAGACAGCCGCTGCCCCGATCGAGCGTGTCAAACTCTTAATCCAAAATCAGGATGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGACTGTTTTAAACGTACAATTCAAGAGGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAGGATAAGGACGGTTACTGGAAATGGTTTGCCGGTAACCTGGCGTCCGGTGGTGCAGCTGGTGCTTCGTCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGGTTGGCAAACGATGCCAAGGCTGCCAAGAAAGGTGGTGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGAAAGACTTTGCAGTCTGATGGTGTTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATTGTTTACCGTGGTTTGTACTTTGGAATGTACGATTCTTTGAAGCCCGTTGTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGCTTTGCCCTCGGTTGGCTCATCACCAACGGTGCCGGGCTTGCATCCTACCCAATTGACACGGTTCGCAGAAGAATGATGATGACATCTGGTGAAGCAGTCAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCTGGTGCCAACATTCTGCGTGCCGTTGCGGGTGCTGGTGTGCTTGCCGGTTACGACAAGTTGCAGGTGATCGTCTTCGGGAAGAAATACGGATCTGGTGGCGCTTAA | 2496 | 48.12 | MADQVQHPTIYQKVAGQLSLQSRVASGFRAGDDGFRNPALYQRRASVSNYSNAAFQYPAMQSSVATTDLSRVASTASPIFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQSETLSPPEIFAHFERDILAAADSSKISSRPSVFSQVYDSTDFNWSDSLLVLLYSFLDQDLEELAMADQVQHPTIYQKVAGQLSLQSRVASGFRAGDDGFRNPALYQRRASVSNYSNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 831 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 45591575 | 45598134 | - | Lag0002781.1 | Lac4g2661 | 606193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac4g2661 | 831 | FunFam | ADP,ATP carrier protein, mitochondrial | 532 | 827 | - | - | |
| Lac4g2661 | 831 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 734 | 820 | IPR018108 | - | |
| Lac4g2661 | 831 | PRINTS | Adenine nucleotide translocator signature | 193 | 206 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Adenine nucleotide translocator signature | 298 | 314 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Adenine nucleotide translocator signature | 167 | 179 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Adenine nucleotide translocator signature | 134 | 155 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Adenine nucleotide translocator signature | 90 | 102 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Lac4g2661 | 831 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 529 | 622 | IPR018108 | - | |
| Lac4g2661 | 831 | Gene3D | Mitochondrial carrier domain | 91 | 380 | IPR023395 | - | |
| Lac4g2661 | 831 | Gene3D | Mitochondrial carrier domain | 532 | 827 | IPR023395 | - | |
| Lac4g2661 | 831 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 293 | 379 | IPR018108 | - | |
| Lac4g2661 | 831 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 181 | IPR018108 | - | |
| Lac4g2661 | 831 | SUPERFAMILY | Mitochondrial carrier | 89 | 375 | IPR023395 | - | |
| Lac4g2661 | 831 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 528 | 828 | IPR002113 | GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Lac4g2661 | 831 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 193 | 285 | IPR018108 | - | |
| Lac4g2661 | 831 | Pfam | Mitochondrial carrier protein | 734 | 822 | IPR018108 | - | |
| Lac4g2661 | 831 | Pfam | Mitochondrial carrier protein | 530 | 626 | IPR018108 | - | |
| Lac4g2661 | 831 | Pfam | Mitochondrial carrier protein | 293 | 377 | IPR018108 | - | |
| Lac4g2661 | 831 | Pfam | Mitochondrial carrier protein | 634 | 727 | IPR018108 | - | |
| Lac4g2661 | 831 | Pfam | Mitochondrial carrier protein | 89 | 185 | IPR018108 | - | |
| Lac4g2661 | 831 | Pfam | Mitochondrial carrier protein | 193 | 286 | IPR018108 | - | |
| Lac4g2661 | 831 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 634 | 726 | IPR018108 | - | |
| Lac4g2661 | 831 | SUPERFAMILY | Mitochondrial carrier | 530 | 816 | IPR023395 | - | |
| Lac4g2661 | 831 | FunFam | ADP,ATP carrier protein, mitochondrial | 91 | 382 | - | - | |
| Lac4g2661 | 831 | PRINTS | Mitochondrial carrier protein signature | 156 | 176 | IPR002067 | GO:0055085(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Mitochondrial carrier protein signature | 258 | 276 | IPR002067 | GO:0055085(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Mitochondrial carrier protein signature | 302 | 324 | IPR002067 | GO:0055085(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Mitochondrial carrier protein signature | 106 | 120 | IPR002067 | GO:0055085(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Mitochondrial carrier protein signature | 93 | 106 | IPR002067 | GO:0055085(InterPro) | |
| Lac4g2661 | 831 | PRINTS | Mitochondrial carrier protein signature | 208 | 226 | IPR002067 | GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac10g0186 | Lac-Chr10:1433878 | Lac4g2661 | Lac-Chr4:45591575 | 3.70E-110 | dispersed | |
| Lac12g0737 | Lac-Chr12:7688994 | Lac4g2661 | Lac-Chr4:45591575 | 1.00E-162 | dispersed | |
| Lac12g0826 | Lac-Chr12:8587030 | Lac4g2661 | Lac-Chr4:45591575 | 1.30E-36 | dispersed | |
| Lac4g2661 | Lac-Chr4:45591575 | Lac6g0184 | Lac-Chr6:1451587 | 1.50E-49 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac4g2661 | K05863 | - | csv:101203733 | 733.791 |