Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2731 ATGGCTTCCAAGAGCGAAGGCAAAGGCATTGGCATTGATCTCGGCACCACTTACAGCTGCATCGGCGTTTGGCAAAACGATAGGGTTGAGATTATTGCCAACGACCAAGGCAACAGAACTACCCCCTCCTATGTGGCTTTCACCGATACCGAACGGCTTATCGGCGATGCGGCCAAGAATCAGGTCGCGATGAATCCTCAGAACACCGTTTTTGACGCCAAGCGGCTCATCGGCCGCCGATTCTCCGACTCTTCCGTTCAGAGCGATATGAAGCTTTGGCCATTCAAGGTCGTTGCAGGTCCCGGAGACAAGCCGATGATCGTCGTCAACTACAAAGGCGAAGAGAAACAATTCGCGCCAGAGGAGATTTCGTCAATGGTGCTGATCAAGATGAAGGAAATCGCCGAGGCTTACTTAGGGTATTATGTAAAGAACGCTGTGATTACAGTCCCCGCCTATTTCAACGATTCACAGCGGCAGGCCACCAAGGACGCCGGAGCAATCGCTGGCCTAAACGTACTGAGAATCATCAACGAGCCAACCGCCGCCGCCATTGCTTACGGTCTGGACAAGAAAGCCTCCCGCTCCGGTGAGAAGAACGTTCTGATCTTCGATCTCGGCGGCGGAACGTTCGACGTTTCGCTGTTGACGATCGAGGAAGGAATCTTCGAAGTGAAAGCCACCGCCGGAGACACTCATCTCGGCGGCGAGGATTTCGATAACCGCCTCGTGAACCACTTCGCGGCGGAGTTCAAAAGGAAGCACAAGAAGGACATCGGCGGCAATGCCAGAGCTCTCCGTCGGCTGAGAACGGCCTGCGAAAGGGCGAAACGGACTCTATCTTCGACAACACAAACTACGATCGAAATCGATTCTTTGTACGAAGGAATCGACTTCTACGCCACGATTACCAGGGCGAGATTCGAGGAACTGAACATGGATTTGTTCAGAAGGTGTATGGAACCAGTGGAGAAATGTCTGCGAGATTCCAAAATTGACAAGGGGCAAATACACGACGTCGTTTTGGTTGGCGGTTCCACAAGAATCCCTAAAGTTCAGCAGCTATTGCAAGATTTCTTCAACGGAAAAGAGCTCTGCAAGAGCATAAACCCTGACGAAGCCGTCGCGTATGGCGCCGCCGTCCAGGCGGCGATTCTGTGCGGCGAAGGCAACGAGAAGGTCCAAGATCTACTTCTTCTCGACGTCACACCTCTAAGTCTTGGAATCGAAACCGCCGGCGGAGTAATGACGGTGTTAATTCCAAGAAACACGACGATTCCGACGAAGAAGGAGCAAGTTTTCTCGACTTATTCGGACAATCAAACGAGCGTTCTAATCCAAGTTTATGAAGGGGAAAGAGCAAGAACAAAAGACAATAACCTTCTAGGAACATTTGAGCTCAAGGGGATTCCACCGGCGCCGAGAGGAGTACCGCAAATCAACGTTTGCTTCGACATCGACGCCAATGGGATTCTGAACGTCACGGCGGAGGACAAGACGGCCGGAGTTAAGAACACGATCACCATTGCCAACGACAAGGGGAGATTGAGCAGAGATGAGATTGAGAGGATGGTGCAGGAGGCGGAGAAATACAAGGCGGAGGATGAACAGGTGAAGAAGAAGGTTGAGGCGAAGAACGCCTTGGAGAATTATGCTTATAACATGAGGAGCACCGTGAGGGATGAGAAATTGGCCGGAAAGATGAATCCGGCGGAGAAGGGGAAGATAGAGAAGGCGATTGATGAGGCAATTGATTGGCTGGAGAGGAACCAGTTGGCTGAAGTGGATGAATTTGAGGACAAGCTGAAGGAACTAGAGGGGCTCTGTAATCCTATCATTGCTAAGCTTTATCAGGGTGGTGCTGGCGGAGATATGCCGATGGGTAACGGCGGCGCTGGAGCTGGGCCAATGATTGAAGAGGTCGATTGA 1929 51.68 MASKSEGKGIGIDLGTTYSCIGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQSDMKLWPFKVVAGPGDKPMIVVNYKGEEKQFAPEEISSMVLIKMKEIAEAYLGYYVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDIGGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRRCMEPVEKCLRDSKIDKGQIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILCGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVTAEDKTAGVKNTITIANDKGRLSRDEIERMVQEAEKYKAEDEQVKKKVEAKNALENYAYNMRSTVRDEKLAGKMNPAEKGKIEKAIDEAIDWLERNQLAEVDEFEDKLKELEGLCNPIIAKLYQGGAGGDMPMGNGGAGAGPMIEEVD 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46236183 46238367 + Lag0002851.1 Lac4g2731 606263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2731 642 Gene3D - 71 126 - -
Lac4g2731 642 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Lac4g2731 642 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Lac4g2731 642 FunFam Heat shock 70 kDa 391 545 - -
Lac4g2731 642 Coils Coil 588 608 - -
Lac4g2731 642 FunFam Heat shock 70 kDa 235 318 - -
Lac4g2731 642 SUPERFAMILY Actin-like ATPase domain 197 387 IPR043129 -
Lac4g2731 642 Gene3D - 10 384 - -
Lac4g2731 642 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lac4g2731 642 CDD HSPA1-2_6-8-like_NBD 10 386 - -
Lac4g2731 642 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Lac4g2731 642 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Lac4g2731 642 Gene3D - 545 619 IPR029048 -
Lac4g2731 642 FunFam Heat shock protein 70 546 619 - -
Lac4g2731 642 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Lac4g2731 642 SUPERFAMILY Actin-like ATPase domain 10 191 IPR043129 -
Lac4g2731 642 Pfam Hsp70 protein 10 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Lac4g2731 642 Gene3D - 192 366 - -
Lac4g2731 642 Coils Coil 521 545 - -
Lac4g2731 642 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Lac4g2731 642 Gene3D Actin; Chain A, domain 4 235 318 - -
Lac4g2731 642 FunFam Heat shock 70 kDa protein 71 126 - -
Lac4g2731 642 FunFam Heat shock protein 70 10 197 - -
Lac4g2731 642 PANTHER HEAT SHOCK PROTEIN 70KDA 10 582 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Lac4g2731 642 FunFam Heat shock 70 kDa protein 198 267 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 396 415 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 369 389 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 209 219 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 337 353 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 58 66 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 146 166 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 8 21 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 36 48 - -
Lac4g2731 642 PRINTS 70kDa heat shock protein signature 477 493 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g0230 Lac-Chr3:1615866 Lac4g2731 Lac-Chr4:46236183 0.00E+00 dispersed
Lac4g2731 Lac-Chr4:46236183 Lac8g2506 Lac-Chr8:42909906 0.00E+00 dispersed
Lac4g2731 Lac-Chr4:46236183 Lac4g2734 Lac-Chr4:46245067 9.40E-28 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2731 K03283 - cit:102619093 1129.39