Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2732 ATGAGCATCACCATGAAGGATTCGACGATGGTGACGCCGGCGGAGGAGACGCCGCGCCGGAGTCTCTGGAACTCGAACGTCGATCTCGTCGTGTCGAGTATGCACACGCCGAGCGTCTACTTCTACCGGCCAACCGGCGCCGCGAATTTCTTCGACGCTCAGGTTCTCAAGGAAGGCCTCAGCAAGGCGCTGGTGCCGTTTTATCCAATAGCTGGACGGTTGAGGCGCGATGAGAACGGTCGAATCGAGATCGACTGTAATGCCGAAGGTGTGCTTCTTGTTGAGGCCGAGACGACGGCAGTAATCGACGATTTCGGTGACTTCGCGCCGACGTTTCAGCTCCGGCAGCTGATACCGGCGGTGGACTACTCCGGCGGAATCGAGTCGTACCCGTTGTTGGTGTTACAGGTGACATACTTCAAATGCGGCGGCGTTTCGCTCGGCGTCGGATTGCAGCACCAGGTGGCGGACGGCTTCTCCGGCCTCCACTTCGTCAACACTTGGTCCGACATGTCGCGCGGCCTCGACCTCAAAGTCCCGCCACTCATCGACCGAACCCTCCTCCGAGCTCGGGACCCACCTCAACCGACCTTCCAACATGTCGAATACCAACCGGCGCAGCCCATGAAAACCCAGGTCCAAACCGACCCGGACGGAACCACCGTCTCCGTCTTCAAGGTCAGCCGCGAGCAGCTCAATCTACTCAAAGCCAAATCCAAAGAGAACGGCAACACCATCAACTACAGCTCCTACGAGATGCTCTCCGCCCACATCTGGCGCTGCACCTGCATGGCACGTGACTTGCCGGAGGATCAGGACATTAAGGTCTACATCGCCATCGACGGCCGCTCCCGGTTGCGCCCGCCGCTCCCCAACGGTTACTTCGGCAACGCCATCTTCACCACTACGCCGGTCGCCGCCGCCGGCGACTTGATGTCGAATCCGACGTGGTTCGCCGCCGACAAGATCCACGACGTCTTGCTGCGAATGGACAACGATTATTTGAGATCGGCTTTGGACTATCTCGAGCTTCAGTCGGACATATCGGTGTTGGTCCGAGGCGCTCATACTTTCCGGTGCCCGAATTTGGGGATCACGAGTTGGGTCCGACTGCCGATTCACGACGCTGATTTCGGGTGGGGCCGCCCGATTTTTATGGGCCCCGGCGGAATTTCGTACGAGGGATTGTCGTATATACTTCCCAGTGCTTCCGACGACGGCAGCTTGTCGGTAGCGATTTCGCTGCAGACTCGGCATATGAAGTTAAATGACGTGTCAATTTTAATTGATTGGACTCTGACGTGGCTATCCTCTTCTTCTCTTCCCCCTTCCCCCTCTTTTACTCCTTTCTTCTTCGACAGCCTTACTGTTGTCACCACCGCCACCGTTTTGCCACTCCACAACCTTGATTCGACACCTGCATCCACACTGCCTCTCCCCAACGACGTTGTCATCTACAACACTCAAATGAACAAAGAACCTAATTTGGAAAGAGTGTGTGTTTCAACTTCGAAGTGGCGTAGCAAGCGTATGGTAGATGACGACGCAGTGGTGAGCTTTGAACGAACGCCTAAATCTGAGGAACAAACGTCTAGTCCCAGATTTGAGAACCCACACTTTAGATCTGGGTCTTCGCTCAAGGCGACGCCGAGCATCAAACCGGAAACGAGGCGCTTAGATGCATTGGAAACGAGCGTGGAACCTAGGCGACAACAACGTAGATGGTAG 1728 56.13 MSITMKDSTMVTPAEETPRRSLWNSNVDLVVSSMHTPSVYFYRPTGAANFFDAQVLKEGLSKALVPFYPIAGRLRRDENGRIEIDCNAEGVLLVEAETTAVIDDFGDFAPTFQLRQLIPAVDYSGGIESYPLLVLQVTYFKCGGVSLGVGLQHQVADGFSGLHFVNTWSDMSRGLDLKVPPLIDRTLLRARDPPQPTFQHVEYQPAQPMKTQVQTDPDGTTVSVFKVSREQLNLLKAKSKENGNTINYSSYEMLSAHIWRCTCMARDLPEDQDIKVYIAIDGRSRLRPPLPNGYFGNAIFTTTPVAAAGDLMSNPTWFAADKIHDVLLRMDNDYLRSALDYLELQSDISVLVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGISYEGLSYILPSASDDGSLSVAISLQTRHMKLNDVSILIDWTLTWLSSSSLPPSPSFTPFFFDSLTVVTTATVLPLHNLDSTPASTLPLPNDVVIYNTQMNKEPNLERVCVSTSKWRSKRMVDDDAVVSFERTPKSEEQTSSPRFENPHFRSGSSLKATPSIKPETRRLDALETSVEPRRQQRRW 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46239150 46242341 - Lag0002852.1 Lac4g2732 606264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2732 575 MobiDBLite consensus disorder prediction 553 575 - -
Lac4g2732 575 MobiDBLite consensus disorder prediction 520 534 - -
Lac4g2732 575 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Lac4g2732 575 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 421 IPR050317 GO:0016747(PANTHER)
Lac4g2732 575 Gene3D - 1 202 IPR023213 -
Lac4g2732 575 Gene3D - 203 423 IPR023213 -
Lac4g2732 575 MobiDBLite consensus disorder prediction 535 551 - -
Lac4g2732 575 MobiDBLite consensus disorder prediction 520 575 - -
Lac4g2732 575 FunFam Tryptamine hydroxycinnamoyl transferase 206 425 - -
Lac4g2732 575 Pfam Transferase family 1 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0784 Lac-Chr2:6077956 Lac4g2732 Lac-Chr4:46239150 2.40E-19 dispersed
Lac4g2732 Lac-Chr4:46239150 Lac1g1678 Lac-Chr1:38221449 1.40E-51 dispersed
Lac4g2732 Lac-Chr4:46239150 Lac4g2735 Lac-Chr4:46249299 2.60E-231 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2732 K13065 - csv:101214857 766.533