Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2735 ATGATCATCACCGTGAAGGATTCGACGATGGTGACGCCGGCGGAGGAGACGCCGCGCCGGAGTCTCTGGAACTCCAACGTCGATCTCGTCGTGCCGAGCATGCACACACCGAGCGTCTACTTCTACCGGCCAACCGGCGCCGCGAATTTCTTCGACGCTCAGGTTCTCAAGGAAGGCCTCAGCAAGGCGCTGGTGCCGTTTTATCCAATGGCTGGACGGTTGAGGCGCGATGAGGACGGTCGAATCGAGATCCACTGTAATGCCGAAGGTGTGCTTCTTGTTGAGGCCGAGACGACGGCGGTTATCGACTATTTCGGTGACTTCGCGCCGACGTTGCAGCTCCGGCAGCTTATACCGGCGGTGGACTACTCCGGAGGAATCGAGTCGTATCCGTTGTTGGTGTTACAGGTGACATACTTCAAATGCGGCGGCGTTTCGCTCGGCGTCGGAATGCAGCACCACGTGGCGGACGGCTTCTCCGGCCTGCACTTCGTCAACACTTGGTCCGACATGTCGCGCGGCCTCGACCTCAAAGTCCCGCCGTTCATCGACCGGACCCTCCTCCGCGCTCGGGACCCACCTCAACCGACCTTCCGACATGTCGAATACCTACCGGCGCCGCCCATGAAAACCCAGGTCCAAACCGACCCGGACGAAACCACCGTCTCCATCTTCAAGCTCAGCCGCGAGCAGCTCAATCTACTCAAAGCCAAATCCAAAGAGAACGGCAACACCATCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTCTGGCGCTGCACTTGCATGGCACGTGACTTGCCGGAGGATCAGGACACTAAGCTCTACATCGCCACCGACGGCCGCGCCCGGTTGCGCCCGCCGCTCCCCAACGGTTACTTCGGCAACGTCATCTTCACCACCACGCCGCTCGCCGTCGCCGGCGACTTGATGTCGAATCCGACGTGGTTCGCCGCCGGCAAGATACACGACGCCTTGCTGCGAATGGACAACGATTATTTGAGATCGGCTTTGGACTATCTCGAGATCCAGCCGGACATATCGGCGTTGGTCCGAGGCGCTCATACTTTCCGTTGCCCGAATTTGGGGATCACGAGCTGGGTCCGGCTGCCGATACACGACGCTGATTTCGGGTGGGGCCGCCCGATTTTTATGGGCCCCGGCGGAATTGCGTACGAGGGATTGTCGTTTATAATTCCCAGTGCTTCCGACGACGGCAGCTTGTCGGTGGCGATTTCGCTGCAGACTCGGCATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATTTGA 1293 59.16 MIITVKDSTMVTPAEETPRRSLWNSNVDLVVPSMHTPSVYFYRPTGAANFFDAQVLKEGLSKALVPFYPMAGRLRRDEDGRIEIHCNAEGVLLVEAETTAVIDYFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTYFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMSRGLDLKVPPFIDRTLLRARDPPQPTFRHVEYLPAPPMKTQVQTDPDETTVSIFKLSREQLNLLKAKSKENGNTINYSSYEMLSGHVWRCTCMARDLPEDQDTKLYIATDGRARLRPPLPNGYFGNVIFTTTPLAVAGDLMSNPTWFAAGKIHDALLRMDNDYLRSALDYLEIQPDISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQTRHMKVFEKLFFDI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46249299 46252808 - Lag0002855.1 Lac4g2735 606267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2735 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 421 IPR050317 GO:0016747(PANTHER)
Lac4g2735 430 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Lac4g2735 430 Gene3D - 1 205 IPR023213 -
Lac4g2735 430 Gene3D - 209 430 IPR023213 -
Lac4g2735 430 FunFam Tryptamine hydroxycinnamoyl transferase 207 428 - -
Lac4g2735 430 Pfam Transferase family 2 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1690 Lac-Chr1:38334332 Lac4g2735 Lac-Chr4:46249299 3.40E-34 dispersed
Lac1g1694 Lac-Chr1:38400004 Lac4g2735 Lac-Chr4:46249299 8.50E-82 dispersed
Lac4g2245 Lac-Chr4:42147118 Lac4g2735 Lac-Chr4:46249299 2.50E-71 dispersed
Lac4g2735 Lac-Chr4:46249299 Lac6g1814 Lac-Chr6:29927702 1.90E-48 dispersed
Lac4g2732 Lac-Chr4:46239150 Lac4g2735 Lac-Chr4:46249299 2.60E-231 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2735 K13065 - csv:101214857 823.157