Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g2737 ATGGGGATATATCTCAGCTCCCCTAAAACAGAAAAGGCCTCAGATGACGGTGAAAACGAAAGACTTCGGTATGGCCTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTGGACACATCAACGTCATTCTTTGGCGTTTATGATGGCCATGGAGGTAAAGCAGTTTCTAAGTTCTGTGCCAAGTATCTTCACCAACAGGTGCTCAAGCATGAATCATATATGGCTGGAGATTTGGGAACTTCAGTACAGAAGGCGTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTGGGAGACAAAATGGACAAGCTTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGGGTAATGAAGCTAACAACCAAATAGATGACTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATCATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCCCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAATCTGTCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCACGGGCTATAGGAGACATGGAGTTTAAGCAGAATAAAAGTATGCCCGCAGAAAAGCAGATTGTAACTGCCAACCCAGATGTAACAACTGTTGAGCTTTGTGAGGATGACGAGTTTCTTGTTATTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAACAACTGGTTGACTACATTAGAGATCAACTTAAAACGGAAAGTAAACTATCAGTTATTTGTGAGAAAGTATTTGACAGATGCTTGGCACCCTCAGCTGGTGGTGAAGGATGTGACAACATGACTATGATTTTGGTTCAGTTTAAGAAACCATTTATCCCAAATGCTGCTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAACCGCCGTCTGATTCAAATGAAGGCTCTTCTAAGACTGAATAG 1086 44.66 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHQQVLKHESYMAGDLGTSVQKAFLRMDEMMRGQRGWRELAILGDKMDKLSGMIEGFIWSPKGNEANNQIDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIRDQLKTESKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKKPFIPNAASAEELPSSSNQPPSDSNEGSSKTE 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46274237 46278428 + Lag0002857.1 Lac4g2737 606269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g2737 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Lac4g2737 361 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Lac4g2737 361 Gene3D - 1 329 IPR036457 -
Lac4g2737 361 CDD PP2Cc 23 328 IPR001932 -
Lac4g2737 361 PANTHER PROTEIN PHOSPHATASE 2C 19 329 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Lac4g2737 361 SMART PP2C_4 13 326 IPR001932 -
Lac4g2737 361 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Lac4g2737 361 Pfam Protein phosphatase 2C 156 313 IPR001932 -
Lac4g2737 361 MobiDBLite consensus disorder prediction 339 361 - -
Lac4g2737 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169(InterPro)
Lac4g2737 361 SMART PP2C_SIG_2 28 328 IPR001932 -
Lac4g2737 361 MobiDBLite consensus disorder prediction 337 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2737 Lac-Chr4:46274237 Lac8g3063 Lac-Chr8:47318245 1.70E-26 dispersed
Lac6g2864 Lac-Chr6:46261533 Lac4g2737 Lac-Chr4:46274237 3.40E-33 transposed
Lac2g0532 Lac-Chr2:3980739 Lac4g2737 Lac-Chr4:46274237 2.30E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g2737 K17499 - csv:101214132 684.871