Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g3028 ATGGCGAGTTTTCATCTTTGTTCTTCAGTTTTCTTCTTCTTCTTCATCCTCTGTTTTGTTCCTGTAATTTTCTCTCGATCGCCTGAAGATCAGCAGACCTTCATCGTTCACGTCTCTAAATCGGAGAAGCCTTCACTGTTCTCCTCTCATCATCATTGGCACTCCTCCATTCTCGAATCACTCTCTCCTTCTCCTCATCCGACGAAGCTTCTTTACAACTACGAACGTGCCGCTAATGGATTCTCCGCTCGCATCACGGCTGCTCAGGCGGCGGAGCTGCGTCAGGCTCCCGGTGTTATTTCGGTGATTCCTGATCGGATCCGACAGCTTCATACGACTCGGACGCCTCATTTCTTAGGTTTGGCGGATAACCTAGGGCTCTGGCCGGACGCGAATTACGCCGAAGATGTGATTATTGGCGTTCTCGACACTGGAATTTGGCCTGAACGGCCGAGTTTCTCCGATGAGGGACTGTCTCCGGTTCCGGAAAGCTGGAAAGGCATCTGCGAGACCGGGGACCGCTTTTCGGCTTCTGCCTGTAATCGGAAGATTATTGGTGCGAGAGCGTACTTTTACGGTTACGAGTCTAGTTTAGGCAGATCGCTTCAAGATTCTTCGGATTTCAAATCTGCTAGGGATACTGACGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAGAATGCGAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGCATGGCGAGCAAAGCTCGTATCGCCGCCTACAAGATCTGCTGGGAATTTGGTTGTTTCGACTCTGACATACTCGCCGCCATGGATCAGGCGATTGCCGATGGCGTCCACATCATCTCTCTCTCCGTTGGATCTACTGGCCGTGCCCCTGCGTACTATCGAGATTCCATCGCAATCGGAGCGTTCGGCGCGATGCAGCACGGGGTCGTCGTCTCTTGCTCCGCCGGAAACTCCGGTCCTGGTCCATACACGGCCGTAAACATCGCTCCATGGATCCTCACCGTCGGTGCTTCCACAATCGACAGAGAGTTTCTCGCGGATGTGATTCTCGGAGATGGTAGAGTTTTCAGCGGCGTATCGCTCTATTCTGGCGATCCTCTTGGCGATTCCAAGCTTCCGTTGGTCTACGCTGGAGATTGCGGTGATAGGTATTGTTATTCTGGAACTCTCGATTCGTCGAAAGTCGCCGGGAAGATCGTCGTATGCGATCGAGGAGGGAACGCCAGAGTTGCCAAAGGAAGCTCCGTGAAAACCGCCGGAGGACTTGGTATGATACTCGCCAATACGGAGGAAAATGGCGAAGAGCTCTTGGCAGATTCTCATCTTATCCCGGGAACAATGGTCGGAGAAATCGCCGGTAACAAACTTAAAGAATACATCCATTCAGATCCGAATCCAACTGCTACAATCGTGTTTCGAGGAACTGTGATCGGCGATTCGCCGCCGGCTCCCCGAGTCGCGGCCTTCTCCAGCCGCGGTCCGAACTACCGCACAGCGGAGATTCTCAAACCGGACGTTATAGCTCCAGGAGTCAACATTTTGGCCGGCTGGAGCGGCTACAGCAGTCCGACCAGTCTAAGCATCGATCCTCGAAGAGTCGAGTTCAACATCATCTCCGGAACTTCAATGTCTTGCCCTCACGTCAGCGGCGTCGCCGCCTTACTCCGGAAGGCTTTTCCGACATGGTCACCGGCGGCAATCAAATCTGCTCTGGTCACCACCTCTTACTCATTGGACACTTCCGGCAGCCCGATCAAAGACCTCTCCACCAGCAAAGAATCAAATTCATTCGTCCATGGCGCCGGCCATATCGATCCCAACAATGCTCTGAATCCCGGCCTGATTTACGATATCAATCCTCAAGACTACGTTTCATTTCTCTGCTCGATCGGTTACGATTCTAAACAAATAGCTGTTTTCGTGAAGGATTCTTCATACGCTAAACTTTGTGAACACAAATTGAGCAACCCCGGCAATCTTAACTACCCATCCTTCGCCGTCGTGTTCGATTCCGACGCCGACGAGGTGGTGAAATACACAAGAACTGTCACAAATGTTGGAGACGAAGCCGATGCTGTTTATGAAGTGAAAGTGGAAGCCCCAGAAGGAGTGGAAATCAGTGTTCTTCCAAAGAAGCTGGAGTTCAACGAGAACAAGACGACACAGTCTTACGAGATTTCATTCACCAAAATCAGTGGATTCACGAAATCAGAAAGCTTCGGATCGATTCAATGGAGTGATGGAAGTCACAACGTTAGAAGTCCAATTGCTGTCTCGTTCAACAGTGGATACGTAGCTTCAATGTAA 2319 51.27 MASFHLCSSVFFFFFILCFVPVIFSRSPEDQQTFIVHVSKSEKPSLFSSHHHWHSSILESLSPSPHPTKLLYNYERAANGFSARITAAQAAELRQAPGVISVIPDRIRQLHTTRTPHFLGLADNLGLWPDANYAEDVIIGVLDTGIWPERPSFSDEGLSPVPESWKGICETGDRFSASACNRKIIGARAYFYGYESSLGRSLQDSSDFKSARDTDGHGTHTASTAAGSFVKNASFFQYARGEARGMASKARIAAYKICWEFGCFDSDILAAMDQAIADGVHIISLSVGSTGRAPAYYRDSIAIGAFGAMQHGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGDPLGDSKLPLVYAGDCGDRYCYSGTLDSSKVAGKIVVCDRGGNARVAKGSSVKTAGGLGMILANTEENGEELLADSHLIPGTMVGEIAGNKLKEYIHSDPNPTATIVFRGTVIGDSPPAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTSLSIDPRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALVTTSYSLDTSGSPIKDLSTSKESNSFVHGAGHIDPNNALNPGLIYDINPQDYVSFLCSIGYDSKQIAVFVKDSSYAKLCEHKLSNPGNLNYPSFAVVFDSDADEVVKYTRTVTNVGDEADAVYEVKVEAPEGVEISVLPKKLEFNENKTTQSYEISFTKISGFTKSESFGSIQWSDGSHNVRSPIAVSFNSGYVASM 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48453912 48456230 - Lag0003148.1 Lac4g3028 606560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g3028 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 111 IPR037045 -
Lac4g3028 772 Pfam Fibronectin type-III domain 663 762 IPR041469 -
Lac4g3028 772 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac4g3028 772 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Lac4g3028 772 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac4g3028 772 FunFam Subtilisin-like protease SBT1.9 23 111 - -
Lac4g3028 772 Pfam Subtilase family 136 603 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac4g3028 772 ProSiteProfiles Serine proteases, subtilase domain profile. 109 614 - -
Lac4g3028 772 SUPERFAMILY PA domain 365 466 IPR046450 -
Lac4g3028 772 Gene3D - 345 481 - -
Lac4g3028 772 CDD Peptidases_S8_3 109 580 IPR034197 -
Lac4g3028 772 FunFam Subtilisin-like protease SBT1.5 136 358 - -
Lac4g3028 772 FunFam subtilisin-like protease SBT1.5 345 481 - -
Lac4g3028 772 Gene3D - 631 765 - -
Lac4g3028 772 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Lac4g3028 772 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Lac4g3028 772 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Lac4g3028 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 760 IPR045051 -
Lac4g3028 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Lac4g3028 772 CDD PA_subtilisin_like 351 474 - -
Lac4g3028 772 FunFam Subtilisin-like protease SBT1.5 631 765 - -
Lac4g3028 772 Pfam PA domain 376 460 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g1471 Lac-Chr13:14765430 Lac4g3028 Lac-Chr4:48453912 5.60E-200 dispersed
Lac4g3028 Lac-Chr4:48453912 Lac6g0258 Lac-Chr6:2099405 2.20E-212 dispersed
Lac9g2543 Lac-Chr9:44095565 Lac4g3028 Lac-Chr4:48453912 2.90E-124 transposed
Lac3g1090 Lac-Chr3:8997369 Lac4g3028 Lac-Chr4:48453912 5.00E-204 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g3028 - - - 0.0