Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac4g3060 ATGGCTGCTCTTCTTCGAGCTCTCTTCCTCTTTTCTCTCCTCATCCCTCTTTCTTCTTCTTCTTCTTCTTCAGCTGATTCTTCAAAGAACACCTTCATTGTGCAGGTTCACAGAGATTCCAAGCCTTCCATTTTCCCAACTCACAAGCACTGGTACGAGTCGTCTCTAGCCTCCATCTCTCCCAATAAGGCAACGACATCTTCTTCCATTGCTGATGGACCCATCATTCACACCTATGAAAATGTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTTTGAAGTTGAGAAGCTTCAAACTTTTCCCCACATCGCCTCCGTCATCCCTGAACAAGTTCGCCATCCTCACACAACTCGTTCCCCTGAGTTCCTTGGCCTTAAGACCACCGACAGTGCTGGGTTGCTCAAAGAGTCCGACTTTGGATCTGACCTTGTAATCGGAGTCATCGATACGGGTATTTGGCCGGAGCGCCAGAGTTTCAACGACCGCGATCTGGGTCCTATTCCTTCCAAATGGAAAGGCCAGTGTGTTACGGCCAAGGACTTTCCGTCCACCTCTTGCAACCGTAAACTTATTGGGGCTCGATTTTTCTGTGGTGGGTATGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGTACCGCTCGCCGCGAGATTCTGATGGCCATGGTACTCACACGGCGTCCATTGCTGCAGGTCGTTATGTCTTTCCAGCTTCAACTTTAGGCTATGCTCGTGGGAGAGCGGCTGGAATGGCTCCTAAGGCTCGTCTTGCCGCCTATAAAGTCTGCTGGAATGCCGGCTGCTACGACTCCGACATTCTTGCTGCTTTTGATGCTGCCGTTTCCGACGGCGTCGATGTTGTGTCACTCAGCGTCGGCGGTGTCGTTGTGCCGTACTATCTCGATGCCATCGCCATAGCGGCTTTTAGAGCGGTGGCATCCGGCGTTTTTGTCTCGGCATCAGCAGGTAACGGTGGCCCGGGGGGTCTCACTGTGACTAATGTGGCACCCTGGGTTACAACTGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAATGGTAGGGTTATACTCGGAACAAGTGTCTATGGCGGACCGGCTCTGGCTCCGGGCCGTTTGTATCCTCTTATTTATGCAGGAACCGAAGGCGGTGATGGGTATTCTTCGTCTCTATGCTTAGAAGGTTCTTTGAACCCCAATTTAGTGAAAGGGAAGCTTGTACTATGCGATAGGGGCATCAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAGAAGGCCGGAGGATTGGGGATGATTTTAGCTAATGGGGTCTTTGACGGTGAGGGTTTAGTAGCTGACTGCCACGTACTACCTGCCACCGCCGTCGGTGCATCCGGCGGCGATGAGATTCGCAAATATATTGCAGAAGCAGCGAAGTCTCAGTCACCGCCAACAGCAACAATTTTGTTCAAGGGAACTCGGCTTGGAGTCAGGCCAGCACCGGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTTAAGCCTGATGTGATTGCGCCTGGTTTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGGCCCTCTGGAATTCCCACAGACAAGCGTACCACAGAGTTCAACATACTTTCCGGCACTTCCATGGCCTGTCCTCATGTCTCAGGCTTGGCTGCCCTTCTGAAGGCGGCACATCCAGGATGGAGTCCAGCAGCTATAAAATCAGCCCTAATGACCACAGCTTATACTTTGGATAACCGGGGTGAGACGATGTTAGATGAATCTTCAGGCAATACTTCCACGGTCTTGGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCGATGGACCCTGGTTTAATCTATGACCTTAACACATATGATTATGTTGATTTCTTGTGTAACTCCAACTACACCACTAAGAATATCCAAGTAATTACGGGGAAGATTGCAGATTGTAGTGGGGCAAAGAGGGCTGGCCATACTGGGAACTTGAATTACCCTTCACTGTCTGTGGTGTTTCAACAATATGGTAAGCACAAGATGTCTACGCATTTCATAAGAAGTGTGACCAACGTTGGGGACGCCAATTCTATCTACAAGGTAACAATAAAGCCTCCAAGTGGAATTTCAGTGACAGTGGAGCCAGAAAAGCTGGCGTTCAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTGCACGCAATGGCTGTTAGACTTTCCCCTGGAAGCTCTAGCATGAAGAGTGGTTCTATAGTTTGGACTGATGGAAAGCACGTAGTCACGAGTCCTTTGGTTGTCACCATGCAGCAACCTCTGCAGTAG 2361 49.85 MAALLRALFLFSLLIPLSSSSSSSADSSKNTFIVQVHRDSKPSIFPTHKHWYESSLASISPNKATTSSSIADGPIIHTYENVFHGFSAKLSPFEVEKLQTFPHIASVIPEQVRHPHTTRSPEFLGLKTTDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGQCVTAKDFPSTSCNRKLIGARFFCGGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGRAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIAAFRAVASGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALAPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNLVKGKLVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGASGGDEIRKYIAEAAKSQSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNSNYTTKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRSVTNVGDANSIYKVTIKPPSGISVTVEPEKLAFRRVGQKLSFLVRVHAMAVRLSPGSSSMKSGSIVWTDGKHVVTSPLVVTMQQPLQ 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48742770 48745130 - Lag0003180.1 Lac4g3060 606592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac4g3060 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Lac4g3060 786 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Lac4g3060 786 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lac4g3060 786 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lac4g3060 786 Gene3D - 349 496 - -
Lac4g3060 786 SUPERFAMILY Protease propeptides/inhibitors 29 114 - -
Lac4g3060 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 116 IPR037045 -
Lac4g3060 786 FunFam Subtilisin-like protease SBT1.5 644 782 - -
Lac4g3060 786 SUPERFAMILY Subtilisin-like 116 631 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac4g3060 786 FunFam Subtilisin-like protease SBT1.5 143 362 - -
Lac4g3060 786 Pfam Peptidase inhibitor I9 31 116 IPR010259 -
Lac4g3060 786 FunFam Subtilisin-like protease SBT1.9 20 116 - -
Lac4g3060 786 ProSiteProfiles Serine proteases, subtilase domain profile. 120 627 - -
Lac4g3060 786 Pfam PA domain 381 470 IPR003137 -
Lac4g3060 786 Gene3D Peptidase S8/S53 domain 143 640 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac4g3060 786 CDD PA_subtilisin_like 355 488 - -
Lac4g3060 786 Gene3D - 644 782 - -
Lac4g3060 786 Pfam Subtilase family 141 608 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac4g3060 786 CDD Peptidases_S8_3 114 593 IPR034197 -
Lac4g3060 786 Pfam Fibronectin type-III domain 675 779 IPR041469 -
Lac4g3060 786 FunFam subtilisin-like protease SBT1.5 349 495 - -
Lac4g3060 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 777 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g3060 Lac-Chr4:48742770 Lac9g1818 Lac-Chr9:37984925 7.80E-242 dispersed
Lac4g3060 Lac-Chr4:48742770 Lac1g2631 Lac-Chr1:47657902 7.30E-208 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac4g3060 - - - 0.0