Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0001 ATGGAATTAGGAAATTCCAAAATTCAGCGACCAGGGTCAGGGGGCGATTTGCCCCAGGGTGGCGAGTACAGCCCTTATCCTATTGCCCGGAGGGTAAATTCCTCCCATACGGTGGTCATGGATGATGACATTGAAAATGCTAGTTTGGGGGTATACCAGGACAGGCAAAGGACTTTCCCTGACATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTCTCAGTACTTCTTCTCTTTGCATTTGGATTAATATTCTACATTGGAGCAAGCACTTCTCCTATTATTGTGTTTGTCTTCTCGATTTGCATCGTCAGCTTCTGCTTTTCAATATATCTCACCAAGTGGGTGCTCTCGAAAGATGAAGGGCCACAGGAGATGGCTCAGATCTCAGAGGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATGGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCTGGAATAGGGAGGTCAACTACTGCTTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCAAATGTCAGGGTTTCTAGTGCTGCTAGGCGATCTGCGAGGGAGGCATTGCAGATCGCTGTTCGCGCGGGTGGTTTTTCTGCAATTGTTGTTGTTGGAATGGCTGTTATTGGTATAGCCATTTTGTATGCTGCATTTCATGTTTGGTTGGATGTGGGTTCACCAGGTTCAACGAAGACTAAATATGAACGGGCATCAGAGTGCTCAAATTCACAACCATGCTCAAATTATGCTTTCACTAACAAAGCCCTATTAGCGAAGTGGCTGTGGCGTTTTCCCCTTGAGTCGTCTCCCATGTGGTACAAGATAATTGTGAGTAAATATCGTCCTCATCCTTCTGAGTGGTTACTGGGTGGGGTTGGTGGCACGTTTAGAAACCCGTGGAAAGATATTATCATGGAGCTCCCCTCCTTTTCTGGTCTTGTGCATCATGTGGTTAGGGATGGAAATCATATGTATTTCTGGGAGGATAAGTGGGTGGGGGATAGCCCTGATCCTTCTGTTGGGTTCTCGTGTAAATCCTACTTTGTTTCTGTGTTGAATCCTCCTCCTTATAGCGAGTCTATCTTCTCTCTTGTGGAAGAGTCAGATCAACTATCCGGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATCCGACTCTCCAGGGCAAAGGAAGATTTTTTTAGCAGGCCGACATGTGTGTGCTCTTATGGAATTTATGAGGGAGAGAAATAATAGGGTTTTTAGGGGGATTGTTAGAAGCTCGGGCGATGTATGGCAACGTTTTTATGTTGCCTCTCGCCTTAAGGCGATTAGGAGACTCGTCGCCTTACTGTGCGCCTTGCGCTTTGAAAACACTGACGAGTTGAATAGGAAGTTGGCTGAGTGGAGACATCTTCTTGTCTCAAAAGGAGGGTGCCTGACTTTTCTCAATCTTCTCCCTTATGAAAGCCCCTTGGAAGTGCCTCTTCTCCTTGTGGGTTATGGTTTTGGAGCTTCTTTCGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATTTATACAAAAGCTGCTGATGTTGGAGCAGACCTCGTTGGAAAAGTTGAGCAGGGGATACCAGAGGATGATCCAAGAAATCCTGCCGTTATTGCAGATCTGGTTGGGGACAATGTGGGTGACTGTGCTGCTCGAGGTGCAGATCTTTTTGAAAGCATTGCTGCTGAAATCATTAGTGCCATGATACTTGGGGGAACAATGGCTCAACGCTGTAAAATTGAAGATCCATCTGGTTTCATTTTGTTTCCGCTGGTAGTACACTCCTTTGATCTGGTAATTTCATCAATTGGCATTCTCTCTATCAGGAGGGGTACTCGTGAATCTGGTGTGAAGAGTCCCATAGAGGATCCAATGACTATTCTGCAGAGAGGATATTCTGTCACTATCATTTTGGCTGTTCTAACATTTGGTGTGTCTACCCGGTGGTTGCTTCACACTGAACAAGCACCTTCTGCATGGTTCAACTTTGCCTTGTGTGGCTTGGTTGGTATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAACCCGTTCGTTCATTAGCACTTTCTAGCTCCACAGGCCATGGGACGAACATTATTGCTGGAGTCAGCTTGGGCCTGGAATCAACAGCGCTCCCTGTTCTTGTTATTAGTGTATCTATTGTTTCGGCATTCTGGTTGGGTCACACATCAGGACTTGTGGACGAAGCTGGAAATCCAACAGGTGGGCTATTTGGTACTGCTGTAGCTACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACGATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAGATGAGTCAGCAGCCAGAAAGTGTTCGGGAGATCACTGATCTTCTTGATGCAGTAGGTAACACAACTAAAGCGACCACAAAAGGTTTTGCCATTGGCTCTGCAGCACTTGCATCCTTCCTACTTTTTAGTGCTTATATGGACGAGGTAGCTGCATTTGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTTATTGGTGGTTTATTGGGTTCCATGCTTATTTTTCTCTTTAGTGCTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTCGTAAAGGAAGTAAGAAGACAGTTCATTGAGAGGCCTGGTATAATGGACTATACGGAGAAACCAGAGTACGGACGTTGCGTTGCTATTGTAGCATCAGCATCTTTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATTATTTCTCCTATGGCAGTTGGCTTTCTGTTTAGAATATTGGGACATTATACTGGGCATCCGCTTCTAGGGGCCAAGGTTGTTGCGGCAATGCTGATGTTTGCGACAGTTTCTGGTATTCTCATGGCCCTTTTTCTGAATACGGCAGGGGGTGCCTGGGATAACGCCAAGAAGTATATAGAGACGGGGGTTCTTGGAGGCAAAGGTAGTGATTGTCATAAAGCAGCCGTAACTGGGGACACCGTAGGTGACCCATTCAAGGACACAGCAGGGCCTTCTCTTCACGTTCTCATAAAAATGCTCGCAACCATAACGCTGGTCATGGCCCCGATCTTTCTGTAA 3282 45.49 MELGNSKIQRPGSGGDLPQGGEYSPYPIARRVNSSHTVVMDDDIENASLGVYQDRQRTFPDMRSKVNTPLIFRILMGINIRVLSVLLLFAFGLIFYIGASTSPIIVFVFSICIVSFCFSIYLTKWVLSKDEGPQEMAQISEAIRDGAEGFFRTQYGTISKMAMLLAVVILCIYLFRSTTPQQESSGIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYAAFHVWLDVGSPGSTKTKYERASECSNSQPCSNYAFTNKALLAKWLWRFPLESSPMWYKIIVSKYRPHPSEWLLGGVGGTFRNPWKDIIMELPSFSGLVHHVVRDGNHMYFWEDKWVGDSPDPSVGFSCKSYFVSVLNPPPYSESIFSLVEESDQLSGFESVDRRVPPQSDSPGQRKIFLAGRHVCALMEFMRERNNRVFRGIVRSSGDVWQRFYVASRLKAIRRLVALLCALRFENTDELNRKLAEWRHLLVSKGGCLTFLNLLPYESPLEVPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKSPIEDPMTILQRGYSVTIILAVLTFGVSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHTSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVAAFAHEPFKQVDIAIPEVFIGGLLGSMLIFLFSAWACSAVGRTAQEVVKEVRRQFIERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGFLFRILGHYTGHPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDCHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 1093
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 52216 77595 - Lag0017085.1 Lac5g0001 606643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0001 1093 Pfam Inorganic H+ pyrophosphatase 113 268 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lac5g0001 1093 Pfam Inorganic H+ pyrophosphatase 531 1088 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lac5g0001 1093 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 532 1092 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lac5g0001 1093 MobiDBLite consensus disorder prediction 1 20 - -
Lac5g0001 1093 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 102 1093 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g3104 Lac-Chr4:49183961 Lac5g0001 Lac-Chr5:52216 2.50E-305 dispersed
Lac4g3107 Lac-Chr4:49239942 Lac5g0001 Lac-Chr5:52216 1.60E-33 dispersed
Lac5g0001 Lac-Chr5:52216 Lac6g2547 Lac-Chr6:43231348 3.40E-110 dispersed
Lac5g0001 Lac-Chr5:52216 Lac3g1739 Lac-Chr3:17739286 5.00E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0001 K23025 - csv:101217198 1044.65