Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0012 ATGAGTCGCTACAAAAAGCAATTGATCGTGGATCAAGCTGCAGAAGAAGGGAATAACGAGGGCAAGGAAATGGGTGACAATTTGGGGAAAGAAGAAGGAATCGATCGTAAAATTGGAGCGCAATTGCTACGAAACCGTGTGGTTGCACAATTGTTAGAAGCGGGGATTGTGGTGCATTCGGTGGTGATAGGGCTTTCGATGGGAGCTTCGGATAATCCTTGCACCATAAGGCCGCTCATTGCGACGCTCTGCTTTCACCAACTCTTTGAAGGGATGGATGGGCTTGGAGGGTGCATTTTGCAGGCGGAATATAAGTTGAAGATGAAGGCGATAATGATATTTTTCTTCTCGATCACAACTCCATTTGGAATAGCATTGGGGATTGGATTGGCGAATGTGTACAGTGAGAATAGTCCCACATCTCTTATAGTTGCGGGGATATTGAATGTTGTGTCTGCTGGGTTGCTGAATTACATGGCGTTGGTTGATTTGTTGGCGTACGATTTCATGGGGGCTAAGTTGCAAGCCAATCTCAAGCTTCATATATGGGCTTATGTTGCGGTTTTGTTGGGCGCTGGAGGCATGTCTTTGATGGCAAAATGGGTTTCCTTTCCCTGCCATCTTCTCCTTTCTTTCCGATCACTTCTTCTTCATCAGTTTGGATCTTCTCGTTCATTTTCTGTGTTGGATCGCGTGGATTTCAACAAGCTACCGATTAATTCCAGATTGATTCCAGTTTTCGTTTTCCAGAATTCTATCCGATAG 765 44.97 MSRYKKQLIVDQAAEEGNNEGKEMGDNLGKEEGIDRKIGAQLLRNRVVAQLLEAGIVVHSVVIGLSMGASDNPCTIRPLIATLCFHQLFEGMDGLGGCILQAEYKLKMKAIMIFFFSITTPFGIALGIGLANVYSENSPTSLIVAGILNVVSAGLLNYMALVDLLAYDFMGAKLQANLKLHIWAYVAVLLGAGGMSLMAKWVSFPCHLLLSFRSLLLHQFGSSRSFSVLDRVDFNKLPINSRLIPVFVFQNSIR 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 154207 155238 - Lag0017096.1 Lac5g0012 606654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0012 254 PANTHER ZINC/IRON TRANSPORTER 40 201 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Lac5g0012 254 Pfam ZIP Zinc transporter 22 199 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Lac5g0012 254 NCBIfam ZIP zinc/iron transport family 15 201 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3344 Lac-Chr1:53117715 Lac5g0012 Lac-Chr5:154207 7.20E-99 dispersed
Lac5g0012 Lac-Chr5:154207 Lac6g0187 Lac-Chr6:1467088 4.70E-39 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0012 K14709 - csv:101204028 309.301