Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac5g0026 | ATGTCGTCGCAACAATCGGCTTTGGATTCTTCAGCTTTTGGCACACAAACTTCGTCCAATCCGATTCCCACGGAAGCTACTCCGGCTCCCTTGGATCCTCCCTCCACCTCCTCCACCATCTCTGAGTCTGAAGAAAATCCCTGCACATCATCTTCACCTTCCTCCACCCCACCTCCGATTCACTTGCCTCTCTCTTGGCCTCCCGATGCCACCCTTTCCCTCCAGTGGATTCACCATCTCATCGCCGCCTTCGACTGGTCTTCCAAAAATTTACCTCCATCCGAGTTTCCTTCCGTCCTTCCCGTCTCCGTTTTCGATGCTCTAGTCCTCACTGCTTCTAAAATCCTCCACAAAGAACCCAATTGCCTCAGAATCCTCGAAGACTCAGTCGCCAGCAGCGACTCCACTGTTGTCGTTGTCGGAGACATCCACGGTCAATTTCACGATCTCCTCTTTCTCCTGCAGGATGCTGGCTTTCCATCTGAAAACCGTTTCTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACATTTTTGCTTTTATTGGCTTGGAAGGTGTTCATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAAGTGCTAATCAAGTACGGAGACAAAGGTAAGCATGTCTATCGGAAGTGTTTGGGATGTTTCGAAGGGTTGCCTTTGGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGCGTATCAGTTCCTTCATCTAAAAGATCAAAAGGGAAAAAAAATCGTAGAATAAGCTTAAATCCTGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCTGGTGATGTTTTGTGGTCTGATCCTTCGATGAATCCTGGTCTCTCCCCAAATAGAGAGAGAGGCATAGGTCTCTTGTGGGGTCCCGATTGCACTGAAGAATTCTTGAAAAATTCGATCTGA | 1062 | 47.83 | MSSQQSALDSSAFGTQTSSNPIPTEATPAPLDPPSTSSTISESEENPCTSSSPSSTPPPIHLPLSWPPDATLSLQWIHHLIAAFDWSSKNLPPSEFPSVLPVSVFDALVLTASKILHKEPNCLRILEDSVASSDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLIKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVSVPSSKRSKGKKNRRISLNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNRERGIGLLWGPDCTEEFLKNSI | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 287811 | 289196 | - | Lag0017110.1 | Lac5g0026 | 606668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac5g0026 | 353 | Gene3D | - | 95 | 352 | IPR029052 | - | |
Lac5g0026 | 353 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 200 | 205 | IPR006186 | GO:0016787(InterPro) | |
Lac5g0026 | 353 | SUPERFAMILY | Metallo-dependent phosphatases | 96 | 351 | IPR029052 | - | |
Lac5g0026 | 353 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 40 | 351 | IPR051134 | - | |
Lac5g0026 | 353 | Pfam | Calcineurin-like phosphoesterase | 136 | 351 | IPR004843 | GO:0016787(InterPro) | |
Lac5g0026 | 353 | SMART | pp2a_7 | 110 | 353 | IPR006186 | GO:0016787(InterPro) | |
Lac5g0026 | 353 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Lac5g0026 | 353 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Lac5g0026 | 353 | PRINTS | Serine/threonine phosphatase family signature | 199 | 223 | IPR006186 | GO:0016787(InterPro) | |
Lac5g0026 | 353 | PRINTS | Serine/threonine phosphatase family signature | 166 | 193 | IPR006186 | GO:0016787(InterPro) | |
Lac5g0026 | 353 | PRINTS | Serine/threonine phosphatase family signature | 236 | 262 | IPR006186 | GO:0016787(InterPro) | |
Lac5g0026 | 353 | PRINTS | Serine/threonine phosphatase family signature | 296 | 323 | IPR006186 | GO:0016787(InterPro) | |
Lac5g0026 | 353 | PRINTS | Serine/threonine phosphatase family signature | 136 | 163 | IPR006186 | GO:0016787(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac5g0026 | Lac-Chr5:287811 | Lac8g2499 | Lac-Chr8:42882799 | 2.20E-63 | dispersed | |
Lac5g0026 | Lac-Chr5:287811 | Lac7g0595 | Lac-Chr7:4756646 | 1.80E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac5g0026 | K04460 | - | csv:116402529 | 593.964 |