Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0104 ATGGGAGAAGAAGAAGGACGATCCTTGGCCGTAACCCCCACATGGGCTTTTGCAACAGTGGTCACTCTCATGGTTTCGCTTGGATTCTTCTTCCAAGGCACGTTGAAACGGACCAAAAAGTGGTTGGATAGGACCAAGAGAAAATCGTTACTCGCTGCGTTGGAGAAGATTAAAGAAGAGCTGATGCTCTTTGGACTGCTGTCGTTGTTGATGGGTCACTGGATTGTTTTTGTCGCAAGAATTTGTGTCAAGTCGTCTATCTTGAGCAGCCGTTTCTATCCCTGTGCGTTGGAGAATGATCTGAAACGAGTTAGACACATTTCTATTGCAATTGAAAACATGAATAGTTCTGTTCCAAGGGAGCATAATAATGCTGGGATACGAGAGTATTGTCCTGAGGGTCGTGAATCGTTTGCTTCATATGAAAGTTTAGAGCAGCTTCATCGATTAATATTCGTTCTTGGTGTCACCCATGTTTCTTATAGCTTCATTGCCATTGCCCTGGCTATGATTAAGATATATGGCTGGAGAACATGGGAAAATGAGGCCAAGGCTTTGGCCACTCAGAACACACCAGAAGAATTTGTACAAGCATCATCAACTGGGCCAAAAATAAGGCGACTAACGACTTTTGTCTTTCACCATACCTCTCATCCATGGAGTCGGCATAGAGTCCTTGTTTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCCATCAATCGTGCTGATTACATGGCTTTGCGGTTGGGCTTCATCAGTACTCATCAACTCCCTATATCATATGACTTCCATAATTATATGCTTCGAAGCATGGACGAGGAATTTCGCGATATGGTTGGTATAAGTGTGCCACTCTGGATATATGCCGTTGCCTGCATCTTCCTCAACTTCCATGGAAGCAATATTTACTTTTGGCTCTCCTTCCTCCCAGCCATTTTGATTCTGCTGATCGGGACGAAACTGCACCGAGTAGTCGTAAAGTTGGCTGTAGAAGTTGTGGATACATCTGCAAGGGGATGTTACCGTTTTAACTTGAGGGATGAACTGTTTTGGTTTGGAAAGCCTAAGCTTCTTTTATGGTTGCTACAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGTGGGAAATTAGGGATCCCTCTTGTTTCATGGAGAACCAAACGTATGTCGTTATCCGCTTGGCCTTCGGGGTTATCACTCAGTTTTGGTGTAGCTTTATAACATTCCCACTCTATGTTATAGTCACTCAGATGGGGTCGAGGTTCAAGAAAACACTTGTATCGGAGAACGTTCGAAACTCGCTTCATCAATGGAAAAGAAGAGTGAAAGCTAGGCCAGGTGCTTCTTCCTCGGTTACACTTATGGGTGCAACATCCTCTGTTAGTACATTGGATGATGACGGTCAGACAACCGATGACTTTACCGCGAACTGCTCGGAGGAAAGCACGTTTCATCAACCTTCATCGGACGACACCGATATACAAATATCTATTAGTTCTAGTCCTCCTTACACCCAGTTCCAACAACAATAG 1554 44.14 MGEEEGRSLAVTPTWAFATVVTLMVSLGFFFQGTLKRTKKWLDRTKRKSLLAALEKIKEELMLFGLLSLLMGHWIVFVARICVKSSILSSRFYPCALENDLKRVRHISIAIENMNSSVPREHNNAGIREYCPEGRESFASYESLEQLHRLIFVLGVTHVSYSFIAIALAMIKIYGWRTWENEAKALATQNTPEEFVQASSTGPKIRRLTTFVFHHTSHPWSRHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHQLPISYDFHNYMLRSMDEEFRDMVGISVPLWIYAVACIFLNFHGSNIYFWLSFLPAILILLIGTKLHRVVVKLAVEVVDTSARGCYRFNLRDELFWFGKPKLLLWLLQFISFQNAFEMATFIWSLWEIRDPSCFMENQTYVVIRLAFGVITQFWCSFITFPLYVIVTQMGSRFKKTLVSENVRNSLHQWKRRVKARPGASSSVTLMGATSSVSTLDDDGQTTDDFTANCSEESTFHQPSSDDTDIQISISSSPPYTQFQQQ 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 849407 854087 - Lag0017188.1 Lac5g0104 606746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0104 517 PANTHER MLO-LIKE PROTEIN 1 2 490 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac5g0104 517 MobiDBLite consensus disorder prediction 487 517 - -
Lac5g0104 517 Pfam Mlo family 6 467 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0104 Lac-Chr5:849407 Lac5g2487 Lac-Chr5:43410405 2.30E-141 dispersed
Lac5g0104 Lac-Chr5:849407 Lac9g2570 Lac-Chr9:44311303 9.70E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0104 K08472 - csv:101217051 890.567