Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0129 ATGGGCAGGATGGGAGGTCGGCAGAGGACTTACAGCGCCAATTCCACCGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCCAGTGCCACTGTTTTTCGAGCGATCTATACTCCCTCTAATGAAGTTGTCGCCATCAAGTGTTTGGATCTTGATCGCTGTAATAGTAATCTAGATGATATACGTAGGGAAGCTCAAACAATGAGTTTGATAGATCATCCGAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAAGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCCTGAAAGAAGCTCTTAAAGCTTTGGAATACCTTCATCGGCAGGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTCGATAGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCTAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCGCCGGAGGTATTGCAACCAGGAACTGGATATAATTCCAAGGCCGATATTTGGTCCTTTGGTATTACAGCATTGGAGTTGGCTCATGGACATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAGAAGTTCTCTAAGAATGCTAAGCCTCCAGAGCTTTCTTTGAAGAAATTATTCGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGACCTGCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAATATAAATTCTTGTAGTGTTAAGGATGCCTTTTGTTCTCAATCTAGTTTGAGGAATTTCAATTCATGTAATGAATCATCTCAGGATGAGCATGGTGTCGGGGCAAGTGGTCAGGGATTGCCACAAGTGGAGTGCTTGAGCAAAAAGGGAAACTTTATGGAAAGTGATATGCTGAAAGCTGGGTTCCAAGAAAAAACTGGATGGAAGAGAAATGGAACTAGCACTGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACCGGGCAAGACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCCGGTATTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGACAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGTGCCTCAGCAAACAGCCTATCAGCTCCCATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCAAAAGCTAATCTCGTACAAATTAAGGGGCGTTTTTCAGTGACTTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGGCGGTCTTCACAGAACTCACCTCTACGAAAGTCGGCTAGTGTTGGTGATTGGATATTTGATGCCAAGCAGCCTGTCAGCCAACCCCCCAAGGAGGCCAACATCAATGTGCCTACATCAATTCTTATTCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAGTGAACTTATTGAATAGCTTACAAACAGCAGACGTGGTTGATGTAACTCAAAACGGAAAGTTGCCTCCATTGCCTCGAAGCTCAGATAATAATGGAAGTGCTGAAACAGTGGCGGTTGAGAGAGAGCGTTTACTGTCGCGAAAGGTCTCCGAACTTCAAGCTAGAATGACGCATCTGACTTATGAATTGACCGCTGAAAAGCTGAAATACATTCAAACTTCCACTGATCAATTTTTGGCCTACAGTTACAAGAGCAGTTCAACTCAGCCTCCAGTCAGGAAGAAAATGAGATCAAGAGGGAAGAGAACGTCTGACAAGGCACGTCCCGTGCTACGATTACTCTCTGTCGTCGAGGCGAAGCCAGCAACCATTTTTCTCAATCTCCCATCGCCATCTTCCATTTGGTTCTCTTCAGAGTTGGCACAATTCAGGTCAGTTGAGATCCCTGATCCTGAGTGGCAATCAGCTCCCAAAACTCCCATGTTGCTCAGTAAGCCCTCAAATTTTATCTTGTTTATTGTCTGGATGGCCATGAGATGGAAAAAAAAAAGCCCTTGGAAGCTTAGTTTGTGA 2388 44.18 MGRMGGRQRTYSANSTDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKEALKALEYLHRQGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKNAKPPELSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMAEMKEEEENINSCSVKDAFCSQSSLRNFNSCNESSQDEHGVGASGQGLPQVECLSKKGNFMESDMLKAGFQEKTGWKRNGTSTEAEASTSGQDIVPGKTKTQMPKGRQTQSGPLLPGIVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDAKQPVSQPPKEANINVPTSILIPHLQNLFHQTSIQQDLIVNLLNSLQTADVVDVTQNGKLPPLPRSSDNNGSAETVAVERERLLSRKVSELQARMTHLTYELTAEKLKYIQTSTDQFLAYSYKSSSTQPPVRKKMRSRGKRTSDKARPVLRLLSVVEAKPATIFLNLPSPSSIWFSSELAQFRSVEIPDPEWQSAPKTPMLLSKPSNFILFIVWMAMRWKKKSPWKLSL 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1050954 1066990 + Lag0017213.1 Lac5g0129 606771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0129 795 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 251 IPR047173 GO:0043539(InterPro)
Lac5g0129 795 Coils Coil 313 333 - -
Lac5g0129 795 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Lac5g0129 795 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Lac5g0129 795 Gene3D Transferase(Phosphotransferase) domain 1 99 344 - -
Lac5g0129 795 MobiDBLite consensus disorder prediction 402 436 - -
Lac5g0129 795 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524(InterPro)
Lac5g0129 795 MobiDBLite consensus disorder prediction 453 477 - -
Lac5g0129 795 MobiDBLite consensus disorder prediction 402 491 - -
Lac5g0129 795 SMART serkin_6 18 303 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g0129 795 SUPERFAMILY Protein kinase-like (PK-like) 17 242 IPR011009 -
Lac5g0129 795 ProSiteProfiles Protein kinase domain profile. 18 310 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g0129 795 Pfam Protein kinase domain 18 232 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0129 Lac-Chr5:1050954 Lac8g2588 Lac-Chr8:43528216 9.90E-128 dispersed
Lac5g0129 Lac-Chr5:1050954 Lac5g2947 Lac-Chr5:47502179 1.60E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86183 PF00069 Pkinase 1.70E-51 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0129 - - - 0.0