Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac5g0129 | ATGGGCAGGATGGGAGGTCGGCAGAGGACTTACAGCGCCAATTCCACCGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCCAGTGCCACTGTTTTTCGAGCGATCTATACTCCCTCTAATGAAGTTGTCGCCATCAAGTGTTTGGATCTTGATCGCTGTAATAGTAATCTAGATGATATACGTAGGGAAGCTCAAACAATGAGTTTGATAGATCATCCGAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAAGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCCTGAAAGAAGCTCTTAAAGCTTTGGAATACCTTCATCGGCAGGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTCGATAGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCTAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCGCCGGAGGTATTGCAACCAGGAACTGGATATAATTCCAAGGCCGATATTTGGTCCTTTGGTATTACAGCATTGGAGTTGGCTCATGGACATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAGAAGTTCTCTAAGAATGCTAAGCCTCCAGAGCTTTCTTTGAAGAAATTATTCGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGACCTGCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAATATAAATTCTTGTAGTGTTAAGGATGCCTTTTGTTCTCAATCTAGTTTGAGGAATTTCAATTCATGTAATGAATCATCTCAGGATGAGCATGGTGTCGGGGCAAGTGGTCAGGGATTGCCACAAGTGGAGTGCTTGAGCAAAAAGGGAAACTTTATGGAAAGTGATATGCTGAAAGCTGGGTTCCAAGAAAAAACTGGATGGAAGAGAAATGGAACTAGCACTGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACCGGGCAAGACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCCGGTATTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGACAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGTGCCTCAGCAAACAGCCTATCAGCTCCCATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCAAAAGCTAATCTCGTACAAATTAAGGGGCGTTTTTCAGTGACTTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGGCGGTCTTCACAGAACTCACCTCTACGAAAGTCGGCTAGTGTTGGTGATTGGATATTTGATGCCAAGCAGCCTGTCAGCCAACCCCCCAAGGAGGCCAACATCAATGTGCCTACATCAATTCTTATTCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAGTGAACTTATTGAATAGCTTACAAACAGCAGACGTGGTTGATGTAACTCAAAACGGAAAGTTGCCTCCATTGCCTCGAAGCTCAGATAATAATGGAAGTGCTGAAACAGTGGCGGTTGAGAGAGAGCGTTTACTGTCGCGAAAGGTCTCCGAACTTCAAGCTAGAATGACGCATCTGACTTATGAATTGACCGCTGAAAAGCTGAAATACATTCAAACTTCCACTGATCAATTTTTGGCCTACAGTTACAAGAGCAGTTCAACTCAGCCTCCAGTCAGGAAGAAAATGAGATCAAGAGGGAAGAGAACGTCTGACAAGGCACGTCCCGTGCTACGATTACTCTCTGTCGTCGAGGCGAAGCCAGCAACCATTTTTCTCAATCTCCCATCGCCATCTTCCATTTGGTTCTCTTCAGAGTTGGCACAATTCAGGTCAGTTGAGATCCCTGATCCTGAGTGGCAATCAGCTCCCAAAACTCCCATGTTGCTCAGTAAGCCCTCAAATTTTATCTTGTTTATTGTCTGGATGGCCATGAGATGGAAAAAAAAAAGCCCTTGGAAGCTTAGTTTGTGA | 2388 | 44.18 | MGRMGGRQRTYSANSTDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKEALKALEYLHRQGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKNAKPPELSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMAEMKEEEENINSCSVKDAFCSQSSLRNFNSCNESSQDEHGVGASGQGLPQVECLSKKGNFMESDMLKAGFQEKTGWKRNGTSTEAEASTSGQDIVPGKTKTQMPKGRQTQSGPLLPGIVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDAKQPVSQPPKEANINVPTSILIPHLQNLFHQTSIQQDLIVNLLNSLQTADVVDVTQNGKLPPLPRSSDNNGSAETVAVERERLLSRKVSELQARMTHLTYELTAEKLKYIQTSTDQFLAYSYKSSSTQPPVRKKMRSRGKRTSDKARPVLRLLSVVEAKPATIFLNLPSPSSIWFSSELAQFRSVEIPDPEWQSAPKTPMLLSKPSNFILFIVWMAMRWKKKSPWKLSL | 795 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1050954 | 1066990 | + | Lag0017213.1 | Lac5g0129 | 606771 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac5g0129 | 795 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 9 | 251 | IPR047173 | GO:0043539(InterPro) | |
Lac5g0129 | 795 | Coils | Coil | 313 | 333 | - | - | |
Lac5g0129 | 795 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 95 | - | - | |
Lac5g0129 | 795 | FunFam | Serine/threonine-protein kinase BLUS1 | 7 | 95 | - | - | |
Lac5g0129 | 795 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 344 | - | - | |
Lac5g0129 | 795 | MobiDBLite | consensus disorder prediction | 402 | 436 | - | - | |
Lac5g0129 | 795 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524(InterPro) | |
Lac5g0129 | 795 | MobiDBLite | consensus disorder prediction | 453 | 477 | - | - | |
Lac5g0129 | 795 | MobiDBLite | consensus disorder prediction | 402 | 491 | - | - | |
Lac5g0129 | 795 | SMART | serkin_6 | 18 | 303 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac5g0129 | 795 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 242 | IPR011009 | - | |
Lac5g0129 | 795 | ProSiteProfiles | Protein kinase domain profile. | 18 | 310 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac5g0129 | 795 | Pfam | Protein kinase domain | 18 | 232 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac5g0129 | Lac-Chr5:1050954 | Lac8g2588 | Lac-Chr8:43528216 | 9.90E-128 | dispersed | |
Lac5g0129 | Lac-Chr5:1050954 | Lac5g2947 | Lac-Chr5:47502179 | 1.60E-29 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86183 | PF00069 | Pkinase | 1.70E-51 | CL0016 | Lac | PK |
Pathway information
