Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0280 ATGTACGAGGAGCTGACGAGGACAATCGGGGAGAAATCGGGCTGGAATACGGGCCAAGGAGGCGGAGCCGGCAAGCGGGACGGGCCAAGGCCAAGCACATGGTCGGCCTCGGCCACCCTCAGCGCGCTCGTGCGGGCCGAGCCCGTTCGGTCTCGTCTGGTCCCCACCGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGCCACGTCTTCCCCCCTCAATTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGAGCTCACAGAAGTTGGAATCAAATGTGATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTCAAGCCGGAGACTCGCCCCGCCGCCCTTCCCGCCGACAATCCCGACCTCCTCTTCTCCGCCTCCGACCCTCTCGACGAAACCCTAGGCCACTCCTTCTGCTACGTCCGCTCTTCCAACCGCTTCCTCTCTCCCTCTCATTCCGATCGCTTTCTTTCCCCTTCTCACTCCCTCCGTTTTTCCCCTCCTCACGAACCTCCGCCGCTCGGGACCAGGACTAGAACTGGCCCGCCGGAGACCGCCTTCAAGGCCATCTCCGGCGCTTCTGTAAGTGCCAACAGTTCTATTCCCAGATCTGTTCTTATGCTCGATGGTGTTTACGACGATGCCACTGACACTGCGCTTGGGGCTTGCGGTGGTGGCTGTGGAGTCAGAGGGAGTATTTTGAATGGCTTTGAGAGTACTTCTTCTTTTACTGCTCTTCCGCTTCAGCCCGTGCCGAGAGGCGGGACTGAGCCGTTGGAGCGGGGTGGCTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCGCTTTCTGGTCCTCTTGATGCGAATGTTGATGGTGCTGGTGCTGCTGTTGCTGGCGCTGCCGGTGGAGGCGGCGGTGGGAGAGTCCATTTCTCGGCTCCGCTTGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGGGCATTTCGGGGTTTAGGAAGGCGTTTTCGAGGAATTTTTCGGATAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTCGTTGGCCGGAAGGAGAGCTCGACGGCGGGAGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCGCTTGGGAAGGCGGGGGAGGATCGGGTACATGTGGTTGTATCGGAAGAGCAAGGGTGGTTGTTTGTTGGAATTTATGATGGGTTTAATGGCCCTGAGGCACCTGAATTCTTGATGGGGAATCTCTATAGAGCAGTCTTCAATGAGCTTCAGGGATTGTTCTGGGAAGTTGATGATAGTGAGGAGGCTGCTGCTAATGTGGTTGCAGAGAGTACAGTCAGTGTGAATGAAACTAATGCTGACCCGTCTTCCACAGCCTCTGGTCAAACGGTTGAAACTAATGGGAATGTTTCAGTGGTTGGAAATGAAGTGGAAGCAGAACAACCGGCTGCTGATCGAGGATCGGTTAAGAGGGTTACGTTTCAACCCGAGGATGGATCGGAGAACAGGCGGAGGCGACGGCTGTGGGAGTATCTAGCGGAGGACGATGCGCAGGACGGACTTGATCTTTCGGGTTCAGATAGATTTGCGTTTTCAGTTGATGATGCGCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGCTGTTATTGTCCAAGTTGAAACAAGGGTTGTCAAAGCATAAGGAGGGTCATGCTAAGACTTTGTTCCCTTGGAAGTATGGTTTGGGAGATAAAGAGAAGGTTGAGGCCGAGAATAGGGTGGAGGAGACATCTTATCGAAGTGGTAAGAGGAGAAAGGAGGGTTTAATTGATCACGAGTTGGTGTTGGGGGCATTGTCACGGGCTCTTGAGATAACTGAATTAGCATATTTGGATATGACAGATAAGTTGCTCGATTCGAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTGCTGGTTGTGTTAATGAGGGACGAAGATGTGTATGTAATGAATGTGGGTGACAGCCGTGCTATTGTTGCACAGTATGAGCAACAAGAAGTTGGCCCAAGTCAAGACTTGAAAGTGGAGGGAGACAAAAGAACAGGCATGGAGGGTATAATTGAGGAGTCAACAGCAATGGGTGAAGGGAAAATAACTCAAACGAACCAACCTTCGGCTCAGACAACAAGATTAACTGCATTGCAGCTATCCACCGATCATAGCACGAGCATTGAAGAGGAAGTAAGAAGAATAAAGAGTGAGCACCCAGATGACAAACAATGCATTGTCAATGATAGAGTGAAGGGCCGTCTAAAGGTTACGAGAGCATTTGGTGCAGGATTTTTGAAACAGCCAAAGTTGAATGATGCATTATTGGAAATGTTTCGGAATGAGTATATTGGTACCGCACCATATTTATCATGCATGCCTTCTCTTCGTCACCATAGACTCTGCCCCACAGATCAATTCATCGTGCTCTCATCTGATGGGCTGTATCAATATCTAACCAATGAAGAAGTGGTTTCTTATGTTGAGAACTTTATGGAGAAGTTCCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCGGCTAGAAAAGCAGGAATGGATTTTCATGAATTGTTGGACATCCCACAGGGGGATCGGAGGAAGTATCATGATGATGTTACTGTTATGGTTTTCTTACATCTCAAGGAGCAAGCCAGCCTGAAGAAATTGGGTGAACTCGGGCGATATCGACAAAACGCTACAGTTGGATGCGTGTTCCCGAAGGTGCAAGTGGATGCCACAATTTGGTTGGAGGATGAACAGCAGGCAATTGGCAAATGGGGTTTTTGCAAAATTCAAGCAGAAGAAAGCTAA 2877 51.13 MYEELTRTIGEKSGWNTGQGGGAGKRDGPRPSTWSASATLSALVRAEPVRSRLVPTASGCPGFAWFDLKRLRIPKNPRRMSRPRLPPSITNLPLVAREGQSSQKLESNVMGSGVSSLFSCLKPETRPAALPADNPDLLFSASDPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSHSLRFSPPHEPPPLGTRTRTGPPETAFKAISGASVSANSSIPRSVLMLDGVYDDATDTALGACGGGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGAGAAVAGAAGGGGGGRVHFSAPLGGMYVKKKRKKGISGFRKAFSRNFSDKRPWVVPVLNFVGRKESSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPEAPEFLMGNLYRAVFNELQGLFWEVDDSEEAAANVVAESTVSVNETNADPSSTASGQTVETNGNVSVVGNEVEAEQPAADRGSVKRVTFQPEDGSENRRRRRLWEYLAEDDAQDGLDLSGSDRFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGHAKTLFPWKYGLGDKEKVEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDSNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYEQQEVGPSQDLKVEGDKRTGMEGIIEESTAMGEGKITQTNQPSAQTTRLTALQLSTDHSTSIEEEVRRIKSEHPDDKQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCMPSLRHHRLCPTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVFLHLKEQASLKKLGELGRYRQNATVGCVFPKVQVDATIWLEDEQQAIGKWGFCKIQAEES 958
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2730965 2739944 - Lag0017364.1 Lac5g0280 606922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0280 958 CDD PP2Cc 612 898 IPR001932 -
Lac5g0280 958 SMART PP2C_4 374 899 IPR001932 -
Lac5g0280 958 ProSiteProfiles PPM-type phosphatase domain profile. 374 901 IPR001932 -
Lac5g0280 958 MobiDBLite consensus disorder prediction 1 34 - -
Lac5g0280 958 SUPERFAMILY PP2C-like 386 898 IPR036457 -
Lac5g0280 958 Gene3D - 360 907 IPR036457 -
Lac5g0280 958 PANTHER PROTEIN PHOSPHATASE 2C 382 898 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Lac5g0280 958 Pfam Protein phosphatase 2C 734 864 IPR001932 -
Lac5g0280 958 Pfam Protein phosphatase 2C 632 686 IPR001932 -
Lac5g0280 958 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2045 Lac-Chr1:41990204 Lac5g0280 Lac-Chr5:2730965 2.00E-116 dispersed
Lac5g0280 Lac-Chr5:2730965 Lac7g0877 Lac-Chr7:7201844 1.40E-56 dispersed
Lac5g0931 Lac-Chr5:13553522 Lac5g0280 Lac-Chr5:2730965 1.20E-08 dispersed
Lac5g0280 Lac-Chr5:2730965 Lac9g2475 Lac-Chr9:43607935 4.40E-122 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0280 - - - 0.0