Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0286 ATGGAAGAACAAGAAGATATCGTTAAATTGAGACCTTCAACACAAAAGGGTATTAATTTCTCAGAGGTTAAACAAATAAAATTTCTTTCTCAGGTAATAGATGAGACACTTCGTGTCAGAAGTCCGACATTTGCAATTTTTCGTGAGGCAACAATCGATGTTGAGATTAATGGTAAAATTATACCAAAAGGATGGAGAGTCCTACCTTGGCTAGGGGAGATTTACATGGATGAAAAACTACATCCTTCCCCACAAGACTTCAATCCTTCAAGATGGGATAATTTTATAGCGAAACCAGGAGCTTTTACTCCGTTTGGATTAGGAGTTAGGCTGTGTCCGGGACGTGATCTTGCTCGACTAGAGATCTCGATTTTTCTTCACTATTTTCTCCTTAATTACAAGATGGAGCGACTTAATCCACAATGCCCATTGACTTACTTTCCAGCTCCTCATCCCAAAGACAAATGCTTGGCAAGAGTGCTCAAAGCTGCATGA 495 39.6 MEEQEDIVKLRPSTQKGINFSEVKQIKFLSQVIDETLRVRSPTFAIFREATIDVEINGKIIPKGWRVLPWLGEIYMDEKLHPSPQDFNPSRWDNFIAKPGAFTPFGLGVRLCPGRDLARLEISIFLHYFLLNYKMERLNPQCPLTYFPAPHPKDKCLARVLKAA 164
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 2862318 2863612 - Lag0017370.1 Lac5g0286 606928
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0286 164 SUPERFAMILY Cytochrome P450 4 160 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0286 164 PANTHER CYTOCHROME P450 26 4 140 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
Lac5g0286 164 Pfam Cytochrome P450 4 142 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0286 164 Gene3D Cytochrome P450 1 162 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0286 164 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 105 114 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac5g0286 164 PRINTS B-class P450 signature 103 112 IPR002397 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0286 164 PRINTS B-class P450 signature 112 123 IPR002397 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0286 164 PRINTS B-class P450 signature 31 42 IPR002397 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0286 164 PRINTS B-class P450 signature 48 75 IPR002397 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0286 164 PRINTS B-class P450 signature 76 91 IPR002397 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0286 Lac-Chr5:2862318 Lac7g0373 Lac-Chr7:2868507 8.20E-53 dispersed
Lac5g0283 Lac-Chr5:2820251 Lac5g0286 Lac-Chr5:2862318 1.50E-49 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0286 K04123 - csv:101207537 267.7